(10 nodes) Specific amino acids and opine-binding periplasmic protein, ABC transporter, and Amino acid ABC transporter, permease protein, 3-TM domain network (Pseudomonas resinovorans NBRC106553)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	aotJ	Arginine/ornithine ABC transporter substrate-binding protein. (258 aa)
	aotJ-2	Arginine/ornithine ABC transporter substrate-binding protein. (257 aa)
	aotP	Arginine/ornithine ABC transporter ATP-binding protein. (254 aa)
	aotM	Arginine/ornithine ABC transporter permease protein AotM. (232 aa)
	aotQ	Arginine/ornithine ABC transporter permease protein AotQ. (229 aa)
	aotJ-3	Arginine/ornithine ABC transporter substrate-binding protein. (260 aa)
	BAN51096.1	Amino acid ABC transporter ATP-binding protein. (257 aa)
	BAN51097.1	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (250 aa)
	BAN51098.1	Amino acid ABC transporter permease protein. (231 aa)
	BAN51099.1	Amino acid ABC transporter permease protein. (229 aa)

Your Current Organism:

Pseudomonas resinovorans NBRC106553

NCBI taxonomy Id: 1245471
Other names: P. resinovorans NBRC 106553, Pseudomonas resinovorans NBRC 106553

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAN51096.1	BAN51097.1	PCA10_53640	PCA10_53650	Amino acid ABC transporter ATP-binding protein.	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	0.995
BAN51096.1	BAN51098.1	PCA10_53640	PCA10_53660	Amino acid ABC transporter ATP-binding protein.	Amino acid ABC transporter permease protein.	0.988
BAN51096.1	BAN51099.1	PCA10_53640	PCA10_53670	Amino acid ABC transporter ATP-binding protein.	Amino acid ABC transporter permease protein.	0.989
BAN51096.1	aotJ	PCA10_53640	PCA10_11940	Amino acid ABC transporter ATP-binding protein.	Arginine/ornithine ABC transporter substrate-binding protein.	0.792
BAN51096.1	aotJ-2	PCA10_53640	PCA10_35590	Amino acid ABC transporter ATP-binding protein.	Arginine/ornithine ABC transporter substrate-binding protein.	0.791
BAN51096.1	aotJ-3	PCA10_53640	PCA10_42480	Amino acid ABC transporter ATP-binding protein.	Arginine/ornithine ABC transporter substrate-binding protein.	0.791
BAN51096.1	aotM	PCA10_53640	PCA10_42460	Amino acid ABC transporter ATP-binding protein.	Arginine/ornithine ABC transporter permease protein AotM.	0.884
BAN51096.1	aotQ	PCA10_53640	PCA10_42470	Amino acid ABC transporter ATP-binding protein.	Arginine/ornithine ABC transporter permease protein AotQ.	0.871
BAN51097.1	BAN51096.1	PCA10_53650	PCA10_53640	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	Amino acid ABC transporter ATP-binding protein.	0.995
BAN51097.1	BAN51098.1	PCA10_53650	PCA10_53660	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	Amino acid ABC transporter permease protein.	0.990
BAN51097.1	BAN51099.1	PCA10_53650	PCA10_53670	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	Amino acid ABC transporter permease protein.	0.995
BAN51097.1	aotM	PCA10_53650	PCA10_42460	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	Arginine/ornithine ABC transporter permease protein AotM.	0.891
BAN51097.1	aotP	PCA10_53650	PCA10_42440	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	Arginine/ornithine ABC transporter ATP-binding protein.	0.799
BAN51097.1	aotQ	PCA10_53650	PCA10_42470	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	Arginine/ornithine ABC transporter permease protein AotQ.	0.837
BAN51098.1	BAN51096.1	PCA10_53660	PCA10_53640	Amino acid ABC transporter permease protein.	Amino acid ABC transporter ATP-binding protein.	0.988
BAN51098.1	BAN51097.1	PCA10_53660	PCA10_53650	Amino acid ABC transporter permease protein.	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	0.990
BAN51098.1	BAN51099.1	PCA10_53660	PCA10_53670	Amino acid ABC transporter permease protein.	Amino acid ABC transporter permease protein.	0.981
BAN51098.1	aotJ	PCA10_53660	PCA10_11940	Amino acid ABC transporter permease protein.	Arginine/ornithine ABC transporter substrate-binding protein.	0.851
BAN51098.1	aotJ-2	PCA10_53660	PCA10_35590	Amino acid ABC transporter permease protein.	Arginine/ornithine ABC transporter substrate-binding protein.	0.833
BAN51098.1	aotJ-3	PCA10_53660	PCA10_42480	Amino acid ABC transporter permease protein.	Arginine/ornithine ABC transporter substrate-binding protein.	0.843