(22 nodes) Peptide transport network (Pseudomonas resinovorans NBRC106553)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BAN46728.1	Putative metallopeptidase; Belongs to the peptidase M24B family. (405 aa)
	dppB	Dipeptide ABC transporter permease protein DppB. (336 aa)
	dppC	Dipeptide ABC transporter permease protein DppC. (303 aa)
	dppD	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily. (324 aa)
	dppF	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily. (323 aa)
	BAN45942.1	Putative oligopeptide transporter. (686 aa)
	BAN51252.1	Putative dipeptide ABC transporter substrate-binding protein. (524 aa)
	pepP	Aminopeptidase P. (444 aa)
	tolQ	TolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (231 aa)
	tolA	TolA protein. (351 aa)
	BAN49412.1	Putative peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (535 aa)
	BAN49411.1	Putative peptide ABC transporter permease protein. (339 aa)
	BAN49410.1	Putative peptide ABC transporter permease protein. (361 aa)
	BAN49409.1	Putative peptide ABC transporter substrate-binding protein. (615 aa)
	BAN49408.1	Putative peptide ABC transporter substrate-binding protein. (608 aa)
	BAN48452.1	Putative ABC transporter ATP-binding protein. (537 aa)
	BAN48450.1	Putative ABC transporter substrate-binding protein. (318 aa)
	BAN48445.1	Hypothetical protein. (526 aa)
	pvdE	Pyoverdine biosynthesis protein PvdE. (552 aa)
	dppA-3	Dipeptide ABC transporter substrate-binding protein. (533 aa)
	dppA-2	Dipeptide ABC transporter substrate-binding protein. (532 aa)
	dppA	Dipeptide ABC transporter substrate-binding protein. (533 aa)

Your Current Organism:

Pseudomonas resinovorans NBRC106553

NCBI taxonomy Id: 1245471
Other names: P. resinovorans NBRC 106553, Pseudomonas resinovorans NBRC 106553

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAN46728.1	dppC	PCA10_09960	PCA10_09920	Putative metallopeptidase; Belongs to the peptidase M24B family.	Dipeptide ABC transporter permease protein DppC.	0.481
BAN46728.1	dppD	PCA10_09960	PCA10_09910	Putative metallopeptidase; Belongs to the peptidase M24B family.	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily.	0.494
BAN46728.1	dppF	PCA10_09960	PCA10_09900	Putative metallopeptidase; Belongs to the peptidase M24B family.	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	0.490
BAN48445.1	BAN48450.1	PCA10_27130	PCA10_27180	Hypothetical protein.	Putative ABC transporter substrate-binding protein.	0.993
BAN48445.1	BAN48452.1	PCA10_27130	PCA10_27200	Hypothetical protein.	Putative ABC transporter ATP-binding protein.	0.989
BAN48445.1	BAN49408.1	PCA10_27130	PCA10_36760	Hypothetical protein.	Putative peptide ABC transporter substrate-binding protein.	0.543
BAN48445.1	BAN49409.1	PCA10_27130	PCA10_36770	Hypothetical protein.	Putative peptide ABC transporter substrate-binding protein.	0.481
BAN48445.1	BAN49410.1	PCA10_27130	PCA10_36780	Hypothetical protein.	Putative peptide ABC transporter permease protein.	0.498
BAN48445.1	BAN49411.1	PCA10_27130	PCA10_36790	Hypothetical protein.	Putative peptide ABC transporter permease protein.	0.436
BAN48445.1	BAN49412.1	PCA10_27130	PCA10_36800	Hypothetical protein.	Putative peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.591
BAN48445.1	BAN51252.1	PCA10_27130	PCA10_55200	Hypothetical protein.	Putative dipeptide ABC transporter substrate-binding protein.	0.504
BAN48445.1	dppA	PCA10_27130	PCA10_09940	Hypothetical protein.	Dipeptide ABC transporter substrate-binding protein.	0.490
BAN48445.1	dppA-2	PCA10_27130	PCA10_09980	Hypothetical protein.	Dipeptide ABC transporter substrate-binding protein.	0.507
BAN48445.1	dppA-3	PCA10_27130	PCA10_10000	Hypothetical protein.	Dipeptide ABC transporter substrate-binding protein.	0.488
BAN48445.1	dppB	PCA10_27130	PCA10_09930	Hypothetical protein.	Dipeptide ABC transporter permease protein DppB.	0.849
BAN48445.1	dppC	PCA10_27130	PCA10_09920	Hypothetical protein.	Dipeptide ABC transporter permease protein DppC.	0.845
BAN48445.1	dppD	PCA10_27130	PCA10_09910	Hypothetical protein.	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily.	0.767
BAN48445.1	dppF	PCA10_27130	PCA10_09900	Hypothetical protein.	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	0.757
BAN48450.1	BAN48445.1	PCA10_27180	PCA10_27130	Putative ABC transporter substrate-binding protein.	Hypothetical protein.	0.993
BAN48450.1	BAN48452.1	PCA10_27180	PCA10_27200	Putative ABC transporter substrate-binding protein.	Putative ABC transporter ATP-binding protein.	0.997