(7 nodes) Solute-binding protein family 5 network (Pseudomonas resinovorans NBRC106553)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BAN51252.1	Putative dipeptide ABC transporter substrate-binding protein. (524 aa)
	dppA	Dipeptide ABC transporter substrate-binding protein. (533 aa)
	dppA-2	Dipeptide ABC transporter substrate-binding protein. (532 aa)
	dppA-3	Dipeptide ABC transporter substrate-binding protein. (533 aa)
	BAN48445.1	Hypothetical protein. (526 aa)
	BAN49408.1	Putative peptide ABC transporter substrate-binding protein. (608 aa)
	BAN49409.1	Putative peptide ABC transporter substrate-binding protein. (615 aa)

Your Current Organism:

Pseudomonas resinovorans NBRC106553

NCBI taxonomy Id: 1245471
Other names: P. resinovorans NBRC 106553, Pseudomonas resinovorans NBRC 106553

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAN48445.1	BAN49408.1	PCA10_27130	PCA10_36760	Hypothetical protein.	Putative peptide ABC transporter substrate-binding protein.	0.543
BAN48445.1	BAN49409.1	PCA10_27130	PCA10_36770	Hypothetical protein.	Putative peptide ABC transporter substrate-binding protein.	0.481
BAN48445.1	BAN51252.1	PCA10_27130	PCA10_55200	Hypothetical protein.	Putative dipeptide ABC transporter substrate-binding protein.	0.504
BAN48445.1	dppA	PCA10_27130	PCA10_09940	Hypothetical protein.	Dipeptide ABC transporter substrate-binding protein.	0.490
BAN48445.1	dppA-2	PCA10_27130	PCA10_09980	Hypothetical protein.	Dipeptide ABC transporter substrate-binding protein.	0.507
BAN48445.1	dppA-3	PCA10_27130	PCA10_10000	Hypothetical protein.	Dipeptide ABC transporter substrate-binding protein.	0.488
BAN49408.1	BAN48445.1	PCA10_36760	PCA10_27130	Putative peptide ABC transporter substrate-binding protein.	Hypothetical protein.	0.543
BAN49408.1	BAN49409.1	PCA10_36760	PCA10_36770	Putative peptide ABC transporter substrate-binding protein.	Putative peptide ABC transporter substrate-binding protein.	0.981
BAN49408.1	BAN51252.1	PCA10_36760	PCA10_55200	Putative peptide ABC transporter substrate-binding protein.	Putative dipeptide ABC transporter substrate-binding protein.	0.455
BAN49408.1	dppA	PCA10_36760	PCA10_09940	Putative peptide ABC transporter substrate-binding protein.	Dipeptide ABC transporter substrate-binding protein.	0.455
BAN49408.1	dppA-2	PCA10_36760	PCA10_09980	Putative peptide ABC transporter substrate-binding protein.	Dipeptide ABC transporter substrate-binding protein.	0.455
BAN49408.1	dppA-3	PCA10_36760	PCA10_10000	Putative peptide ABC transporter substrate-binding protein.	Dipeptide ABC transporter substrate-binding protein.	0.455
BAN49409.1	BAN48445.1	PCA10_36770	PCA10_27130	Putative peptide ABC transporter substrate-binding protein.	Hypothetical protein.	0.481
BAN49409.1	BAN49408.1	PCA10_36770	PCA10_36760	Putative peptide ABC transporter substrate-binding protein.	Putative peptide ABC transporter substrate-binding protein.	0.981
BAN49409.1	BAN51252.1	PCA10_36770	PCA10_55200	Putative peptide ABC transporter substrate-binding protein.	Putative dipeptide ABC transporter substrate-binding protein.	0.455
BAN49409.1	dppA	PCA10_36770	PCA10_09940	Putative peptide ABC transporter substrate-binding protein.	Dipeptide ABC transporter substrate-binding protein.	0.455
BAN49409.1	dppA-2	PCA10_36770	PCA10_09980	Putative peptide ABC transporter substrate-binding protein.	Dipeptide ABC transporter substrate-binding protein.	0.455
BAN49409.1	dppA-3	PCA10_36770	PCA10_10000	Putative peptide ABC transporter substrate-binding protein.	Dipeptide ABC transporter substrate-binding protein.	0.455
BAN51252.1	BAN48445.1	PCA10_55200	PCA10_27130	Putative dipeptide ABC transporter substrate-binding protein.	Hypothetical protein.	0.504
BAN51252.1	BAN49408.1	PCA10_55200	PCA10_36760	Putative dipeptide ABC transporter substrate-binding protein.	Putative peptide ABC transporter substrate-binding protein.	0.455