STRINGSTRING
AFR_07855 AFR_07855 AFR_07860 AFR_07860 AFR_07865 AFR_07865 AFR_07890 AFR_07890 AFR_32275 AFR_32275 AFR_32280 AFR_32280 AFR_32285 AFR_32285 AFR_32290 AFR_32290
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFR_07855ABC transporter permease; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (314 aa)
AFR_07860ABC transporter permease; COG4779 ABC-type enterobactin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (347 aa)
AFR_07865ABC transporter ATP-binding protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components. (264 aa)
AFR_07890Periplasmic iron-transport lipoprotein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component. (338 aa)
AFR_32275COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components. (268 aa)
AFR_32280ABC transporter permease; COG4779 ABC-type enterobactin transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (343 aa)
AFR_32285ABC transporter permease; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (354 aa)
AFR_32290Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component. (336 aa)
Your Current Organism:
Actinoplanes friuliensis
NCBI taxonomy Id: 1246995
Other names: A. friuliensis DSM 7358, Actinoplanes friuliensis DSM 7358, Actinoplanes friuliensis HAG 010964
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