STRINGSTRING
dnaN dnaN rnt rnt dnaX dnaX EBS_0769 EBS_0769 EBS_0770 EBS_0770 holB holB holC holC EBS_1596 EBS_1596 EBS_1604 EBS_1604 holA holA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaNDNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (366 aa)
rntRibonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. (209 aa)
dnaXDNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (539 aa)
EBS_0769Hypothetical protein. (209 aa)
EBS_0770Hypothetical protein. (476 aa)
holBDNA polymerase III subunit delta'. (334 aa)
holCDNA polymerase III subunit chi. (142 aa)
EBS_1596Pseudogene. DNA polymerase III subunit alpha. This CDS appears to have a frameshift mutation. (824 aa)
EBS_1604DNA polymerase III subunit alpha. (1195 aa)
holADNA polymerase III subunit delta. (334 aa)
Your Current Organism:
endosymbiont of unidentified
NCBI taxonomy Id: 1248727
Other names: e. of unidentified scaly snail isolate Monju, endosymbiont of unidentified scaly snail isolate Monju
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