STRINGSTRING
ALO47666.1 ALO47666.1 ALO45710.1 ALO45710.1 ALO45773.1 ALO45773.1 ALO45637.1 ALO45637.1 ALO46194.1 ALO46194.1 ALO46732.1 ALO46732.1 ALO46837.1 ALO46837.1 ALO47185.1 ALO47185.1 ALO47195.1 ALO47195.1 ALO47211.1 ALO47211.1 ALO47435.1 ALO47435.1 ALO47542.1 ALO47542.1 ALO45549.1 ALO45549.1 ALO47550.1 ALO47550.1 ALO45232.1 ALO45232.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALO47666.1Pfam:pfam00593 TonB dependent receptor. (704 aa)
ALO45710.1TonB-dependent outer membrane receptor; Pfam:pfam00593 TonB dependent receptor. (685 aa)
ALO45773.1Pfam:pfam00593 TonB dependent receptor. (749 aa)
ALO45637.1Hypothetical protein; Pfam:pfam07715 TonB-dependent Receptor Plug Domain. (729 aa)
ALO46194.1Hypothetical protein; Pfam:pfam07715 TonB-dependent Receptor Plug Domain. (778 aa)
ALO46732.1Hypothetical protein; Pfam:pfam07715 TonB-dependent Receptor Plug Domain. (718 aa)
ALO46837.1Outer membrane receptor protein; Pfam:pfam00593 TonB dependent receptor. (761 aa)
ALO47185.1Putative Fe transport outer membrane receptor protein; Pfam:pfam00593 TonB dependent receptor. (787 aa)
ALO47195.1Hypothetical protein; Pfam:pfam00593 TonB dependent receptor. (710 aa)
ALO47211.1Hypothetical protein; Pfam:pfam07715 TonB-dependent Receptor Plug Domain. (614 aa)
ALO47435.1Pfam:pfam00593 TonB dependent receptor. (755 aa)
ALO47542.1TonB-dependent receptor for ferrichrome transport; Pfam:pfam00593 TonB dependent receptor. (716 aa)
ALO45549.1Pfam:pfam14905 Outer membrane protein beta-barrel family. (707 aa)
ALO47550.1Pfam:pfam00593 TonB dependent receptor. (695 aa)
ALO45232.1Ligand-gated channel protein; Pfam:pfam00593 TonB dependent receptor. (704 aa)
Your Current Organism:
Pseudohongiella spirulinae
NCBI taxonomy Id: 1249552
Other names: KCTC 32221, LMG 27470, LMG:27470, Nonhongiella spirulinensis, P. spirulinae, Pseudohongiella spirulinae corrig. Wang et al. 2015, gamma proteobacterium Ma-20, strain Ma-20
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