10 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP33604.1	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family. (99 aa)
	AGP38448.1	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (58 aa)
	AGP38449.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (88 aa)
	AGP38706.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (436 aa)
	AGP38707.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (147 aa)
	AGP39558.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (252 aa)
	AGP40451.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (355 aa)
	AGP40726.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (82 aa)
	AGP41834.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (312 aa)
	AGP41931.1	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (54 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP33604.1	AGP38448.1	SCE1572_03265	SCE1572_30585	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.845
AGP33604.1	AGP38707.1	SCE1572_03265	SCE1572_32020	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.577
AGP33604.1	AGP39558.1	SCE1572_03265	SCE1572_36745	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.577
AGP33604.1	AGP40451.1	SCE1572_03265	SCE1572_41695	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.577
AGP33604.1	AGP40726.1	SCE1572_03265	SCE1572_43330	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.577
AGP33604.1	AGP41834.1	SCE1572_03265	SCE1572_49500	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.577
AGP33604.1	AGP41931.1	SCE1572_03265	SCE1572_50020	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.845
AGP38448.1	AGP33604.1	SCE1572_30585	SCE1572_03265	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	0.845
AGP38448.1	AGP38449.1	SCE1572_30585	SCE1572_30590	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.642
AGP38448.1	AGP38707.1	SCE1572_30585	SCE1572_32020	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.535
AGP38448.1	AGP39558.1	SCE1572_30585	SCE1572_36745	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.562
AGP38448.1	AGP40451.1	SCE1572_30585	SCE1572_41695	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.535
AGP38448.1	AGP40726.1	SCE1572_30585	SCE1572_43330	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.535
AGP38448.1	AGP41834.1	SCE1572_30585	SCE1572_49500	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.535
AGP38449.1	AGP38448.1	SCE1572_30590	SCE1572_30585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.642
AGP38706.1	AGP38707.1	SCE1572_32015	SCE1572_32020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.553
AGP38707.1	AGP33604.1	SCE1572_32020	SCE1572_03265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the UPF0337 (CsbD) family.	0.577
AGP38707.1	AGP38448.1	SCE1572_32020	SCE1572_30585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.535
AGP38707.1	AGP38706.1	SCE1572_32020	SCE1572_32015	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.553
AGP38707.1	AGP41931.1	SCE1572_32020	SCE1572_50020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.535