28 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP33148.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (143 aa)
	AGP33149.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (246 aa)
	AGP33150.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (167 aa)
	AGP33151.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (255 aa)
	AGP36621.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (734 aa)
	AGP36622.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
	AGP36623.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (256 aa)
	AGP36624.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa)
	AGP37370.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (429 aa)
	AGP37371.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (301 aa)
	AGP37372.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
	AGP37373.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (249 aa)
	AGP37374.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (229 aa)
	AGP37375.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (205 aa)
	AGP38993.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (434 aa)
	AGP38994.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (298 aa)
	AGP38995.1	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (384 aa)
	AGP38996.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (353 aa)
	AGP38997.1	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (233 aa)
	AGP39532.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (717 aa)
	AGP39533.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (318 aa)
	AGP39534.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (261 aa)
	AGP32728.1	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	AGP32923.1	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	AGP41325.1	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (268 aa)
	AGP41326.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (406 aa)
	AGP41645.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (294 aa)
	AGP41646.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (390 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP32728.1	AGP33149.1	SCE1572_36620	SCE1572_00705	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.913
AGP32728.1	AGP33150.1	SCE1572_36620	SCE1572_00710	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.953
AGP32728.1	AGP36621.1	SCE1572_36620	SCE1572_20250	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.778
AGP32728.1	AGP36622.1	SCE1572_36620	SCE1572_20255	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.953
AGP32728.1	AGP37370.1	SCE1572_36620	SCE1572_24505	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.753
AGP32728.1	AGP37371.1	SCE1572_36620	SCE1572_24510	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.955
AGP32728.1	AGP37372.1	SCE1572_36620	SCE1572_24515	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.960
AGP32728.1	AGP38994.1	SCE1572_36620	SCE1572_33600	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.713
AGP32728.1	AGP38995.1	SCE1572_36620	SCE1572_33605	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.624
AGP32728.1	AGP39532.1	SCE1572_36620	SCE1572_36605	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.949
AGP32728.1	AGP39533.1	SCE1572_36620	SCE1572_36610	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.996
AGP32728.1	AGP39534.1	SCE1572_36620	SCE1572_36615	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.828
AGP32728.1	AGP41326.1	SCE1572_36620	SCE1572_46670	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.956
AGP32728.1	AGP41645.1	SCE1572_36620	SCE1572_48455	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.955
AGP32728.1	AGP41646.1	SCE1572_36620	SCE1572_48460	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.778
AGP32923.1	AGP33149.1	SCE1572_46660	SCE1572_00705	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.957
AGP32923.1	AGP33150.1	SCE1572_46660	SCE1572_00710	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.968
AGP32923.1	AGP33151.1	SCE1572_46660	SCE1572_00715	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.419
AGP32923.1	AGP36621.1	SCE1572_46660	SCE1572_20250	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.842
AGP32923.1	AGP36622.1	SCE1572_46660	SCE1572_20255	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.977