Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGP32462.1 | AGP33800.1 | SCE1572_22740 | SCE1572_04385 | Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.407 |
| AGP32462.1 | AGP33802.1 | SCE1572_22740 | SCE1572_04395 | Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.620 |
| AGP32462.1 | AGP34356.1 | SCE1572_22740 | SCE1572_07455 | Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.409 |
| AGP32462.1 | AGP37838.1 | SCE1572_22740 | SCE1572_27185 | Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.664 |
| AGP32462.1 | bamD | SCE1572_22740 | SCE1572_21770 | Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.634 |
| AGP32462.1 | lnt-2 | SCE1572_22740 | SCE1572_22315 | Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.424 |
| AGP33800.1 | AGP32462.1 | SCE1572_04385 | SCE1572_22740 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
| AGP33800.1 | AGP33801.1 | SCE1572_04385 | SCE1572_04390 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.870 |
| AGP33800.1 | AGP33802.1 | SCE1572_04385 | SCE1572_04395 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.849 |
| AGP33800.1 | AGP33803.1 | SCE1572_04385 | SCE1572_04400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.502 |
| AGP33800.1 | AGP33804.1 | SCE1572_04385 | SCE1572_04405 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.858 |
| AGP33800.1 | AGP34356.1 | SCE1572_04385 | SCE1572_07455 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.457 |
| AGP33800.1 | AGP37838.1 | SCE1572_04385 | SCE1572_27185 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.781 |
| AGP33800.1 | bamD | SCE1572_04385 | SCE1572_21770 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.488 |
| AGP33800.1 | lnt-2 | SCE1572_04385 | SCE1572_22315 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.429 |
| AGP33801.1 | AGP33800.1 | SCE1572_04390 | SCE1572_04385 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.870 |
| AGP33801.1 | AGP33802.1 | SCE1572_04390 | SCE1572_04395 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.979 |
| AGP33801.1 | AGP33803.1 | SCE1572_04390 | SCE1572_04400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.776 |
| AGP33801.1 | AGP33804.1 | SCE1572_04390 | SCE1572_04405 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.934 |
| AGP33801.1 | AGP37838.1 | SCE1572_04390 | SCE1572_27185 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.758 |
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