10 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP33769.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (310 aa)
	AGP36387.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (284 aa)
	AGP36974.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (253 aa)
	AGP36975.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (285 aa)
	AGP36976.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (231 aa)
	AGP36977.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (340 aa)
	AGP37857.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (375 aa)
	AGP32570.1	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	AGP39697.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (197 aa)
	AGP40887.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (491 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP32570.1	AGP33769.1	SCE1572_27325	SCE1572_04205	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.991
AGP32570.1	AGP36974.1	SCE1572_27325	SCE1572_22260	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.990
AGP32570.1	AGP36975.1	SCE1572_27325	SCE1572_22265	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.990
AGP32570.1	AGP36977.1	SCE1572_27325	SCE1572_22275	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.983
AGP32570.1	AGP37857.1	SCE1572_27325	SCE1572_27320	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.992
AGP32570.1	AGP39697.1	SCE1572_27325	SCE1572_37520	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.857
AGP32570.1	AGP40887.1	SCE1572_27325	SCE1572_44195	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.975
AGP33769.1	AGP32570.1	SCE1572_04205	SCE1572_27325	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Organic solvent ABC transporter ATP-binding protein; ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AGP33769.1	AGP36387.1	SCE1572_04205	SCE1572_18950	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.989
AGP33769.1	AGP36974.1	SCE1572_04205	SCE1572_22260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.474
AGP33769.1	AGP36975.1	SCE1572_04205	SCE1572_22265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.502
AGP33769.1	AGP36976.1	SCE1572_04205	SCE1572_22270	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.990
AGP33769.1	AGP36977.1	SCE1572_04205	SCE1572_22275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.989
AGP33769.1	AGP37857.1	SCE1572_04205	SCE1572_27320	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.983
AGP33769.1	AGP39697.1	SCE1572_04205	SCE1572_37520	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.853
AGP33769.1	AGP40887.1	SCE1572_04205	SCE1572_44195	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.986
AGP36387.1	AGP33769.1	SCE1572_18950	SCE1572_04205	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.989
AGP36387.1	AGP36974.1	SCE1572_18950	SCE1572_22260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.989
AGP36387.1	AGP36975.1	SCE1572_18950	SCE1572_22265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.989
AGP36387.1	AGP36977.1	SCE1572_18950	SCE1572_22275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.983