11 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP35416.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (991 aa)
	AGP35806.1	beta-D-glucosideglucohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (730 aa)
	AGP32426.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
	AGP37524.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family. (424 aa)
	AGP32535.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
	AGP38629.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (941 aa)
	AGP38695.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family. (559 aa)
	AGP39823.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (813 aa)
	AGP40256.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (833 aa)
	AGP40755.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (919 aa)
	AGP32874.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP32426.1	AGP32535.1	SCE1572_20985	SCE1572_25980	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
AGP32426.1	AGP32874.1	SCE1572_20985	SCE1572_44285	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AGP32426.1	AGP35416.1	SCE1572_20985	SCE1572_13310	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32426.1	AGP35806.1	SCE1572_20985	SCE1572_15600	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	beta-D-glucosideglucohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32426.1	AGP37524.1	SCE1572_20985	SCE1572_25345	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family.	0.921
AGP32426.1	AGP38629.1	SCE1572_20985	SCE1572_31615	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32426.1	AGP38695.1	SCE1572_20985	SCE1572_31960	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family.	0.926
AGP32426.1	AGP39823.1	SCE1572_20985	SCE1572_38215	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.914
AGP32426.1	AGP40256.1	SCE1572_20985	SCE1572_40565	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32426.1	AGP40755.1	SCE1572_20985	SCE1572_43480	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32535.1	AGP32426.1	SCE1572_25980	SCE1572_20985	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
AGP32535.1	AGP32874.1	SCE1572_25980	SCE1572_44285	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AGP32535.1	AGP35416.1	SCE1572_25980	SCE1572_13310	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32535.1	AGP35806.1	SCE1572_25980	SCE1572_15600	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	beta-D-glucosideglucohydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32535.1	AGP37524.1	SCE1572_25980	SCE1572_25345	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family.	0.921
AGP32535.1	AGP38629.1	SCE1572_25980	SCE1572_31615	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32535.1	AGP38695.1	SCE1572_25980	SCE1572_31960	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 1 family.	0.928
AGP32535.1	AGP39823.1	SCE1572_25980	SCE1572_38215	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.914
AGP32535.1	AGP40256.1	SCE1572_25980	SCE1572_40565	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906
AGP32535.1	AGP40755.1	SCE1572_25980	SCE1572_43480	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.906