6 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP37174.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (433 aa)
	AGP37173.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (460 aa)
	AGP41261.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (447 aa)
	AGP40818.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (456 aa)
	AGP40874.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (505 aa)
	AGP38779.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (493 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP37173.1	AGP37174.1	SCE1572_23420	SCE1572_23425	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.811
AGP37173.1	AGP40874.1	SCE1572_23420	SCE1572_44125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.751
AGP37174.1	AGP37173.1	SCE1572_23425	SCE1572_23420	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.811
AGP38779.1	AGP40874.1	SCE1572_32420	SCE1572_44125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.759
AGP40874.1	AGP37173.1	SCE1572_44125	SCE1572_23420	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.751
AGP40874.1	AGP38779.1	SCE1572_44125	SCE1572_32420	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.759