Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGP32523.1 | AGP32524.1 | SCE1572_25770 | SCE1572_25775 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.914 |
| AGP32523.1 | AGP34047.1 | SCE1572_25770 | SCE1572_05765 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.529 |
| AGP32523.1 | AGP35421.1 | SCE1572_25770 | SCE1572_13335 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.566 |
| AGP32523.1 | AGP37479.1 | SCE1572_25770 | SCE1572_25100 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.457 |
| AGP32523.1 | AGP38019.1 | SCE1572_25770 | SCE1572_28225 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.455 |
| AGP32523.1 | AGP39144.1 | SCE1572_25770 | SCE1572_34490 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.616 |
| AGP32523.1 | AGP40751.1 | SCE1572_25770 | SCE1572_43460 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.526 |
| AGP32523.1 | AGP41613.1 | SCE1572_25770 | SCE1572_48250 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.588 |
| AGP32523.1 | AGP42241.1 | SCE1572_25770 | SCE1572_51725 | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.567 |
| AGP32524.1 | AGP32523.1 | SCE1572_25775 | SCE1572_25770 | TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.914 |
| AGP32524.1 | AGP38019.1 | SCE1572_25775 | SCE1572_28225 | TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.421 |
| AGP32524.1 | AGP38486.1 | SCE1572_25775 | SCE1572_30815 | TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.744 |
| AGP32524.1 | AGP40751.1 | SCE1572_25775 | SCE1572_43460 | TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.530 |
| AGP32524.1 | AGP41613.1 | SCE1572_25775 | SCE1572_48250 | TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.551 |
| AGP34047.1 | AGP32523.1 | SCE1572_05765 | SCE1572_25770 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.529 |
| AGP34047.1 | AGP38486.1 | SCE1572_05765 | SCE1572_30815 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.617 |
| AGP34047.1 | AGP40751.1 | SCE1572_05765 | SCE1572_43460 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.525 |
| AGP34047.1 | AGP41125.1 | SCE1572_05765 | SCE1572_45480 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.457 |
| AGP34047.1 | AGP41613.1 | SCE1572_05765 | SCE1572_48250 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.589 |
| AGP35421.1 | AGP32523.1 | SCE1572_13335 | SCE1572_25770 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Biopolymer transporter TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.566 |
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