45 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP41392.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (209 aa)
	AGP42335.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (133 aa)
	AGP41646.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (390 aa)
	AGP41329.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (304 aa)
	AGP41326.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (406 aa)
	AGP41325.1	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (268 aa)
	AGP32923.1	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	AGP41016.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (208 aa)
	AGP40818.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (456 aa)
	AGP40518.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (586 aa)
	AGP39534.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (261 aa)
	AGP39533.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (318 aa)
	AGP38997.1	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (233 aa)
	AGP38995.1	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (384 aa)
	AGP38993.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (434 aa)
	AGP38853.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (300 aa)
	AGP38831.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (541 aa)
	AGP38779.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (493 aa)
	AGP38208.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (470 aa)
	AGP37623.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (251 aa)
	AGP37509.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (305 aa)
	AGP37384.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (299 aa)
	AGP37375.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (205 aa)
	AGP37374.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (229 aa)
	AGP37373.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (249 aa)
	AGP37372.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
	AGP37370.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (429 aa)
	AGP36972.1	Transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (312 aa)
	AGP36723.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (301 aa)
	AGP36624.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa)
	AGP36623.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (256 aa)
	AGP36622.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
	AGP36621.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (734 aa)
	AGP36500.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (195 aa)
	AGP35589.1	Aminobenzoyl-glutamate transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (521 aa)
	AGP34840.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (287 aa)
	AGP34535.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (431 aa)
	AGP34053.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (444 aa)
	AGP34011.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (346 aa)
	AGP33906.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the nlpA lipoprotein family. (276 aa)
	metN	Macrolide ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (332 aa)
	AGP33337.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (252 aa)
	AGP33151.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (255 aa)
	AGP33149.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (246 aa)
	AGP33148.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (143 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP32923.1	AGP33149.1	SCE1572_46660	SCE1572_00705	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.957
AGP32923.1	AGP33151.1	SCE1572_46660	SCE1572_00715	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.419
AGP32923.1	AGP34053.1	SCE1572_46660	SCE1572_05795	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.428
AGP32923.1	AGP34535.1	SCE1572_46660	SCE1572_08470	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.448
AGP32923.1	AGP36621.1	SCE1572_46660	SCE1572_20250	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.842
AGP32923.1	AGP36622.1	SCE1572_46660	SCE1572_20255	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.977
AGP32923.1	AGP36623.1	SCE1572_46660	SCE1572_20260	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.636
AGP32923.1	AGP37370.1	SCE1572_46660	SCE1572_24505	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.827
AGP32923.1	AGP37372.1	SCE1572_46660	SCE1572_24515	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.982
AGP32923.1	AGP37373.1	SCE1572_46660	SCE1572_24520	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.675
AGP32923.1	AGP37375.1	SCE1572_46660	SCE1572_24530	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.611
AGP32923.1	AGP38831.1	SCE1572_46660	SCE1572_32710	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.419
AGP32923.1	AGP38993.1	SCE1572_46660	SCE1572_33595	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.494
AGP32923.1	AGP38995.1	SCE1572_46660	SCE1572_33605	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.817
AGP32923.1	AGP39533.1	SCE1572_46660	SCE1572_36610	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.991
AGP32923.1	AGP39534.1	SCE1572_46660	SCE1572_36615	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.673
AGP32923.1	AGP41325.1	SCE1572_46660	SCE1572_46665	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.924
AGP32923.1	AGP41326.1	SCE1572_46660	SCE1572_46670	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.995
AGP32923.1	AGP41646.1	SCE1572_46660	SCE1572_48460	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.851
AGP33148.1	AGP33149.1	SCE1572_00700	SCE1572_00705	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.991