Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGP32114.1 | AGP32154.1 | SCE1572_04795 | SCE1572_06940 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.614 |
| AGP32114.1 | AGP32443.1 | SCE1572_04795 | SCE1572_21860 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.919 |
| AGP32114.1 | rplT | SCE1572_04795 | SCE1572_42225 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.429 |
| AGP32114.1 | rsfS | SCE1572_04795 | SCE1572_22165 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.754 |
| AGP32154.1 | AGP32114.1 | SCE1572_06940 | SCE1572_04795 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.614 |
| AGP32154.1 | AGP32443.1 | SCE1572_06940 | SCE1572_21860 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| AGP32154.1 | ftsZ | SCE1572_06940 | SCE1572_10535 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.443 |
| AGP32154.1 | rsfS | SCE1572_06940 | SCE1572_22165 | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.404 |
| AGP32176.1 | AGP35595.1 | SCE1572_08425 | SCE1572_14285 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.627 |
| AGP32348.1 | AGP35595.1 | SCE1572_17460 | SCE1572_14285 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.617 |
| AGP32348.1 | AGP36127.1 | SCE1572_17460 | SCE1572_17445 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.511 |
| AGP32348.1 | AGP37283.1 | SCE1572_17460 | SCE1572_24045 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.767 |
| AGP32437.1 | AGP37283.1 | SCE1572_21650 | SCE1572_24045 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.520 |
| AGP32437.1 | AGP38786.1 | SCE1572_21650 | SCE1572_32460 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.538 |
| AGP32443.1 | AGP32114.1 | SCE1572_21860 | SCE1572_04795 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.919 |
| AGP32443.1 | AGP32154.1 | SCE1572_21860 | SCE1572_06940 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| AGP32443.1 | rplT | SCE1572_21860 | SCE1572_42225 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.429 |
| AGP32443.1 | rsfS | SCE1572_21860 | SCE1572_22165 | Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.754 |
| AGP32489.1 | rsfS | SCE1572_23545 | SCE1572_22165 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.662 |
| AGP32790.1 | AGP35595.1 | SCE1572_40625 | SCE1572_14285 | acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.589 |
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