24 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP38853.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (300 aa)
	AGP33149.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (246 aa)
	metN	Macrolide ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (332 aa)
	AGP35589.1	Aminobenzoyl-glutamate transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (521 aa)
	AGP36500.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (195 aa)
	AGP36622.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
	AGP36624.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa)
	AGP37173.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (460 aa)
	AGP37174.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (433 aa)
	AGP37372.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
	AGP38779.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (493 aa)
	AGP38995.1	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (384 aa)
	AGP38997.1	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (233 aa)
	AGP39088.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (370 aa)
	AGP39533.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (318 aa)
	AGP39670.1	Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (576 aa)
	AGP40818.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (456 aa)
	AGP40874.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (505 aa)
	AGP41016.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (208 aa)
	AGP41261.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (447 aa)
	AGP32923.1	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	AGP41326.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family. (406 aa)
	AGP41392.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (209 aa)
	AGP42335.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (133 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP32923.1	AGP33149.1	SCE1572_46660	SCE1572_00705	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.957
AGP32923.1	AGP36622.1	SCE1572_46660	SCE1572_20255	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.977
AGP32923.1	AGP37372.1	SCE1572_46660	SCE1572_24515	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.982
AGP32923.1	AGP38995.1	SCE1572_46660	SCE1572_33605	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.817
AGP32923.1	AGP39533.1	SCE1572_46660	SCE1572_36610	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.991
AGP32923.1	AGP41326.1	SCE1572_46660	SCE1572_46670	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.995
AGP33149.1	AGP32923.1	SCE1572_00705	SCE1572_46660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
AGP33149.1	AGP36622.1	SCE1572_00705	SCE1572_20255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.711
AGP33149.1	AGP36624.1	SCE1572_00705	SCE1572_20265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.960
AGP33149.1	AGP38997.1	SCE1572_00705	SCE1572_33615	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.832
AGP33149.1	AGP41326.1	SCE1572_00705	SCE1572_46670	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.591
AGP36622.1	AGP32923.1	SCE1572_20255	SCE1572_46660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AGP36622.1	AGP33149.1	SCE1572_20255	SCE1572_00705	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.711
AGP36622.1	AGP36624.1	SCE1572_20255	SCE1572_20265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.994
AGP36622.1	AGP38997.1	SCE1572_20255	SCE1572_33615	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.885
AGP36624.1	AGP33149.1	SCE1572_20265	SCE1572_00705	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.960
AGP36624.1	AGP36622.1	SCE1572_20265	SCE1572_20255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.994
AGP36624.1	AGP37372.1	SCE1572_20265	SCE1572_24515	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.983
AGP36624.1	AGP38995.1	SCE1572_20265	SCE1572_33605	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.830
AGP36624.1	AGP39533.1	SCE1572_20265	SCE1572_36610	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.	0.993