Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGP32463.1 | AGP34148.1 | SCE1572_22755 | SCE1572_06335 | Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.918 |
| AGP32624.1 | AGP35579.1 | SCE1572_30530 | SCE1572_14200 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.617 |
| AGP32624.1 | AGP35739.1 | SCE1572_30530 | SCE1572_15165 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.679 |
| AGP32624.1 | AGP36826.1 | SCE1572_30530 | SCE1572_21400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.631 |
| AGP34148.1 | AGP32463.1 | SCE1572_06335 | SCE1572_22755 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.918 |
| AGP34162.1 | AGP35579.1 | SCE1572_06410 | SCE1572_14200 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.459 |
| AGP34162.1 | AGP35739.1 | SCE1572_06410 | SCE1572_15165 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.496 |
| AGP34162.1 | AGP36826.1 | SCE1572_06410 | SCE1572_21400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.462 |
| AGP34162.1 | AGP38309.1 | SCE1572_06410 | SCE1572_29810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.587 |
| AGP34326.1 | AGP38309.1 | SCE1572_07305 | SCE1572_29810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.772 |
| AGP34847.1 | AGP35669.1 | SCE1572_10170 | SCE1572_14740 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.410 |
| AGP34847.1 | AGP38406.1 | SCE1572_10170 | SCE1572_30355 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.435 |
| AGP34847.1 | mltG | SCE1572_10170 | SCE1572_26235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.545 |
| AGP34847.1 | rlpA | SCE1572_10170 | SCE1572_21975 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.404 |
| AGP35579.1 | AGP32624.1 | SCE1572_14200 | SCE1572_30530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.617 |
| AGP35579.1 | AGP34162.1 | SCE1572_14200 | SCE1572_06410 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.459 |
| AGP35669.1 | AGP34847.1 | SCE1572_14740 | SCE1572_10170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.410 |
| AGP35669.1 | mltG | SCE1572_14740 | SCE1572_26235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.413 |
| AGP35739.1 | AGP32624.1 | SCE1572_15165 | SCE1572_30530 | Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.679 |
| AGP35739.1 | AGP34162.1 | SCE1572_15165 | SCE1572_06410 | Type VI secretion protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.496 |
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