Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGP32534.1 | AGP33013.1 | SCE1572_25975 | SCE1572_51995 | Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.911 |
| AGP32534.1 | AGP35688.1 | SCE1572_25975 | SCE1572_14855 | Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.620 |
| AGP32534.1 | AGP42287.1 | SCE1572_25975 | SCE1572_51980 | Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.601 |
| AGP32567.1 | AGP39651.1 | SCE1572_27270 | SCE1572_37270 | Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.908 |
| AGP32567.1 | AGP42287.1 | SCE1572_27270 | SCE1572_51980 | Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.647 |
| AGP33013.1 | AGP32534.1 | SCE1572_51995 | SCE1572_25975 | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| AGP33013.1 | AGP35688.1 | SCE1572_51995 | SCE1572_14855 | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.674 |
| AGP33013.1 | AGP39651.1 | SCE1572_51995 | SCE1572_37270 | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.668 |
| AGP33013.1 | AGP42283.1 | SCE1572_51995 | SCE1572_51960 | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.713 |
| AGP33013.1 | AGP42286.1 | SCE1572_51995 | SCE1572_51975 | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.637 |
| AGP33013.1 | AGP42287.1 | SCE1572_51995 | SCE1572_51980 | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.878 |
| AGP33013.1 | AGP42291.1 | SCE1572_51995 | SCE1572_52010 | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.564 |
| AGP33527.1 | AGP36550.1 | SCE1572_02800 | SCE1572_19850 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.906 |
| AGP33527.1 | AGP42283.1 | SCE1572_02800 | SCE1572_51960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.804 |
| AGP33527.1 | AGP42286.1 | SCE1572_02800 | SCE1572_51975 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.757 |
| AGP33527.1 | AGP42287.1 | SCE1572_02800 | SCE1572_51980 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.635 |
| AGP35688.1 | AGP32534.1 | SCE1572_14855 | SCE1572_25975 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.620 |
| AGP35688.1 | AGP33013.1 | SCE1572_14855 | SCE1572_51995 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Type II secretory protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.674 |
| AGP35688.1 | AGP39651.1 | SCE1572_14855 | SCE1572_37270 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.478 |
| AGP35688.1 | AGP42287.1 | SCE1572_14855 | SCE1572_51980 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.647 |
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