27 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP34787.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (204 aa)
	AGP33209.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily. (206 aa)
	AGP32043.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	AGP33256.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (219 aa)
	AGP32088.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily. (230 aa)
	AGP33758.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (206 aa)
	AGP32165.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily. (216 aa)
	AGP34518.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (238 aa)
	AGP34558.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (214 aa)
	AGP34641.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (207 aa)
	AGP34805.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily. (220 aa)
	AGP36147.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (244 aa)
	AGP36314.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (196 aa)
	AGP37291.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily. (201 aa)
	AGP32591.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily. (205 aa)
	AGP38380.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily. (221 aa)
	AGP38501.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (280 aa)
	AGP38564.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (210 aa)
	AGP38683.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (219 aa)
	AGP38837.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (352 aa)
	AGP39080.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (303 aa)
	AGP32718.1	Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	AGP39898.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily. (208 aa)
	AGP39903.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily. (208 aa)
	AGP32785.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily. (235 aa)
	AGP40312.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily. (186 aa)
	AGP42251.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (216 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP32088.1	AGP34518.1	SCE1572_03490	SCE1572_08370	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.421
AGP32088.1	AGP34641.1	SCE1572_03490	SCE1572_09045	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.535
AGP32088.1	AGP38564.1	SCE1572_03490	SCE1572_31270	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.722
AGP32088.1	AGP38837.1	SCE1572_03490	SCE1572_32740	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.661
AGP32165.1	AGP33758.1	SCE1572_08055	SCE1572_04145	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.474
AGP32165.1	AGP34641.1	SCE1572_08055	SCE1572_09045	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.427
AGP32165.1	AGP38683.1	SCE1572_08055	SCE1572_31900	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.588
AGP32165.1	AGP38837.1	SCE1572_08055	SCE1572_32740	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.421
AGP32165.1	AGP39903.1	SCE1572_08055	SCE1572_38670	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily.	0.629
AGP32165.1	AGP42251.1	SCE1572_08055	SCE1572_51785	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.487
AGP32591.1	AGP32718.1	SCE1572_28375	SCE1572_35530	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
AGP32591.1	AGP33256.1	SCE1572_28375	SCE1572_01285	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.770
AGP32591.1	AGP33758.1	SCE1572_28375	SCE1572_04145	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.435
AGP32591.1	AGP36314.1	SCE1572_28375	SCE1572_18545	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.589
AGP32591.1	AGP38564.1	SCE1572_28375	SCE1572_31270	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.577
AGP32718.1	AGP32591.1	SCE1572_35530	SCE1572_28375	Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.	0.921
AGP32718.1	AGP33209.1	SCE1572_35530	SCE1572_01040	Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily.	0.438
AGP32718.1	AGP34787.1	SCE1572_35530	SCE1572_09840	Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.442
AGP32718.1	AGP36314.1	SCE1572_35530	SCE1572_18545	Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.468
AGP32718.1	AGP37291.1	SCE1572_35530	SCE1572_24090	Maleylacetoacetate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GST superfamily.	0.438