11 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP35669.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (228 aa)
	AGP35767.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (388 aa)
	AGP35789.1	Hypothetical protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. (779 aa)
	AGP37115.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (925 aa)
	AGP37759.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (837 aa)
	AGP38406.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (621 aa)
	AGP39631.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (777 aa)
	AGP33049.1	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (947 aa)
	AGP33496.1	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (870 aa)
	AGP34273.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (662 aa)
	AGP34847.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (885 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP33049.1	AGP33496.1	SCE1572_00180	SCE1572_02610	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.902
AGP33049.1	AGP34273.1	SCE1572_00180	SCE1572_07025	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.466
AGP33049.1	AGP35789.1	SCE1572_00180	SCE1572_15505	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.	0.952
AGP33049.1	AGP38406.1	SCE1572_00180	SCE1572_30355	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.412
AGP33496.1	AGP33049.1	SCE1572_02610	SCE1572_00180	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.902
AGP33496.1	AGP34273.1	SCE1572_02610	SCE1572_07025	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.456
AGP33496.1	AGP34847.1	SCE1572_02610	SCE1572_10170	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.404
AGP33496.1	AGP35789.1	SCE1572_02610	SCE1572_15505	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.	0.951
AGP33496.1	AGP38406.1	SCE1572_02610	SCE1572_30355	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.435
AGP34273.1	AGP33049.1	SCE1572_07025	SCE1572_00180	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.466
AGP34273.1	AGP33496.1	SCE1572_07025	SCE1572_02610	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.456
AGP34273.1	AGP34847.1	SCE1572_07025	SCE1572_10170	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.574
AGP34273.1	AGP35669.1	SCE1572_07025	SCE1572_14740	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.403
AGP34273.1	AGP35789.1	SCE1572_07025	SCE1572_15505	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.	0.482
AGP34847.1	AGP33496.1	SCE1572_10170	SCE1572_02610	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.404
AGP34847.1	AGP34273.1	SCE1572_10170	SCE1572_07025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.574
AGP34847.1	AGP35669.1	SCE1572_10170	SCE1572_14740	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.410
AGP34847.1	AGP35789.1	SCE1572_10170	SCE1572_15505	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.	0.413
AGP34847.1	AGP37115.1	SCE1572_10170	SCE1572_23100	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.587
AGP34847.1	AGP38406.1	SCE1572_10170	SCE1572_30355	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.435