22 items (Sorangium cellulosum So01572) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGP34557.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (159 aa)
	AGP33267.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (817 aa)
	AGP36282.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (304 aa)
	AGP37048.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (298 aa)
	AGP37095.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (672 aa)
	glmS	Glutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (606 aa)
	purF	Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (479 aa)
	AGP38326.1	Asparagine synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (609 aa)
	AGP32627.1	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1535 aa)
	AGP39280.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (278 aa)
	AGP40407.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (581 aa)
	glmS-2	Glutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (611 aa)
	AGP40939.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (973 aa)
	AGP41310.1	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (259 aa)
	AGP41606.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (790 aa)
	AGP41634.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (619 aa)
	AGP41708.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (615 aa)
	AGP41848.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (611 aa)
	AGP41867.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (821 aa)
	AGP41989.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (601 aa)
	AGP35376.1	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (273 aa)
	AGP36106.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (817 aa)

Your Current Organism:

Sorangium cellulosum So01572

NCBI taxonomy Id: 1254432
Other names: S. cellulosum So0157-2, Sorangium cellulosum So0157-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGP32627.1	AGP37095.1	SCE1572_30760	SCE1572_22980	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.417
AGP32627.1	AGP38326.1	SCE1572_30760	SCE1572_29900	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Asparagine synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.417
AGP32627.1	AGP41634.1	SCE1572_30760	SCE1572_48375	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.851
AGP32627.1	AGP41708.1	SCE1572_30760	SCE1572_48815	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.851
AGP32627.1	AGP41848.1	SCE1572_30760	SCE1572_49580	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.851
AGP32627.1	AGP41989.1	SCE1572_30760	SCE1572_50345	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.417
AGP32627.1	glmS	SCE1572_30760	SCE1572_24630	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.	0.952
AGP32627.1	glmS-2	SCE1572_30760	SCE1572_43025	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.	0.952
AGP32627.1	purF	SCE1572_30760	SCE1572_26085	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.	0.955
AGP35376.1	AGP39280.1	SCE1572_13100	SCE1572_35245	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.700
AGP36282.1	AGP37048.1	SCE1572_18375	SCE1572_22660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.924
AGP36282.1	AGP37095.1	SCE1572_18375	SCE1572_22980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.908
AGP36282.1	AGP38326.1	SCE1572_18375	SCE1572_29900	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Asparagine synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.908
AGP36282.1	AGP41989.1	SCE1572_18375	SCE1572_50345	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.908
AGP37048.1	AGP36282.1	SCE1572_22660	SCE1572_18375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.924
AGP37048.1	AGP37095.1	SCE1572_22660	SCE1572_22980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.908
AGP37048.1	AGP38326.1	SCE1572_22660	SCE1572_29900	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Asparagine synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.908
AGP37048.1	AGP41989.1	SCE1572_22660	SCE1572_50345	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.908
AGP37095.1	AGP32627.1	SCE1572_22980	SCE1572_30760	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AGP37095.1	AGP36282.1	SCE1572_22980	SCE1572_18375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.908