STRINGSTRING
AGA31825.1 AGA31825.1 adrA adrA AGA31886.1 AGA31886.1 bvgS bvgS AGA31929.1 AGA31929.1 AGA31982.1 AGA31982.1 AGA31983.1 AGA31983.1 AGA32023.1 AGA32023.1 crp crp yhfA yhfA dosC dosC algR algR AGA32240.1 AGA32240.1 AGA32242.1 AGA32242.1 AGA32243.1 AGA32243.1 phoP phoP AGA32259.1 AGA32259.1 envZ envZ ompR ompR AGA32576.1 AGA32576.1 AGA32579.1 AGA32579.1 phoB phoB phoR phoR AGA32704.1 AGA32704.1 atoS atoS AGA32779.1 AGA32779.1 pcoS pcoS irlR irlR fnrA fnrA AGA32973.1 AGA32973.1 fixJ fixJ AGA33035.1 AGA33035.1 yegE yegE yddU yddU yciK yciK AGA33183.1 AGA33183.1 AGA33184.1 AGA33184.1 AGA33213.1 AGA33213.1 AGA33255.1 AGA33255.1 AGA33418.1 AGA33418.1 AGA33419.1 AGA33419.1 AGA33532.1 AGA33532.1 AGA33668.1 AGA33668.1 crp-2 crp-2 AGA33740.1 AGA33740.1 anr anr AGA33830.1 AGA33830.1 luxQ luxQ AGA34060.1 AGA34060.1 AGA34109.1 AGA34109.1 degU degU nodV nodV AGA34135.1 AGA34135.1 AGA34136.1 AGA34136.1 pilS pilS AGA34159.1 AGA34159.1 rpoN rpoN narQ narQ AGA34352.1 AGA34352.1 AGA34391.1 AGA34391.1 zraR zraR AGA34529.1 AGA34529.1 AGA34587.1 AGA34587.1 AGA34599.1 AGA34599.1 AGA34633.1 AGA34633.1 yfgF-2 yfgF-2 AGA34823.1 AGA34823.1 AGA34979.1 AGA34979.1 flbD flbD AGA35160.1 AGA35160.1 AGA35322.1 AGA35322.1 AGA35471.1 AGA35471.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGA31825.1Putative LuxR-family transcriptional regulator. (201 aa)
adrAResponse regulator protein with GGDEF domain. (367 aa)
AGA31886.1Response regulator containing a CheY-like receiver domain and an HD-GYP domain. (473 aa)
bvgSPhytochrome, two-component sensor histidine kinase; Cyanobacterial phytochrome B. (731 aa)
AGA31929.1Large Ala/Glu-rich protein; Identified in proteome by 2DE - MALDI-TOF/TOF MS analysis. (367 aa)
AGA31982.1Nitrate/nitrite sensor protein. (638 aa)
AGA31983.1Nitrate/nitrite response regulator protein. (205 aa)
AGA32023.1Chemotaxis protein histidine kinase CheA domain-containing protein; Similar to ThithDRAFT_1127. (659 aa)
crpCRP transcriptional dual regulator/ cyclic AMP receptor protein. (211 aa)
yhfAOsmC/Ohr family protein. (151 aa)
dosCDiguanylate cyclase (GGDEF domain). (369 aa)
algRResponse regulator receiver protein. (235 aa)
AGA32240.1Signal transduction histidine kinase, LytS. (350 aa)
AGA32242.1Putative two-component response regulator and GGDEF family protein YeaJ. (496 aa)
AGA32243.1Protein of unknown function DUF323. (294 aa)
phoPTwo component transcriptional regulator, winged helix family. (234 aa)
AGA32259.1Sensor protein PhoQ. (433 aa)
envZPeriplasmic Sensor Signal Transduction Histidine Kinase. (443 aa)
ompRTwo component transcriptional regulator, winged helix family. (243 aa)
AGA32576.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (1110 aa)
AGA32579.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (423 aa)
phoBPhosphate regulon transcriptional regulatory protein PhoB (SphR). (229 aa)
phoRPhosphate regulon sensor protein PhoR (SphS). (444 aa)
AGA32704.1Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF). (328 aa)
atoSPAS/PAC sensor signal transduction histidine kinase. (356 aa)
AGA32779.1Cytochrome c. (152 aa)
pcoSHeavy metal sensor histidine kinase; Member of a two-component regulatory system. (464 aa)
irlRDNA-binding heavy metal response regulator. (226 aa)
fnrACRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (239 aa)
AGA32973.1Metal-dependent phosphohydrolase, HD subdomain protein. (193 aa)
fixJTwo-component nitrogen fixation transcriptional regulator FixJ. (212 aa)
AGA33035.1Periplasmic sensor signal transduction histidine kinase. (522 aa)
yegEDiguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (914 aa)
yddUResponse regulator receiver modulated diguanylate cyclase/phosphodiesterase. (803 aa)
yciKShort chain dehydrogenase. (251 aa)
AGA33183.1Multi-sensor signal transduction histidine kinase. (524 aa)
AGA33184.1Putative transcriptional regulatory protein. (218 aa)
AGA33213.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (359 aa)
AGA33255.1Type IV pilus biogenesis protein PilZ. (115 aa)
AGA33418.1Nitrate/nitrite sensor protein. (647 aa)
AGA33419.1Nitrate/nitrite response regulator protein. (209 aa)
AGA33532.1CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (188 aa)
AGA33668.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (1005 aa)
crp-2CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (204 aa)
AGA33740.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (1157 aa)
anrTranscriptional regulator, Crp/Fnr family. (243 aa)
AGA33830.1Hypothetical protein. (122 aa)
luxQPAS protein. (1324 aa)
AGA34060.1Response regulator. (378 aa)
AGA34109.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (734 aa)
degUDNA-binding response regulator, LuxR family. (263 aa)
nodVSensory box histidine kinase. (937 aa)
AGA34135.1Response regulator receiver. (148 aa)
AGA34136.1GGDEF family protein. (603 aa)
pilSTwo-component sensor PilS. (545 aa)
AGA34159.1Fis family two component sigma-54 specific transcriptional regulator - like protein. (457 aa)
rpoNRNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (472 aa)
narQNitrate/nitrite sensor protein. (542 aa)
AGA34352.1Nitrate/nitrite response regulator protein. (219 aa)
AGA34391.1Sensor histidine kinase - like protein. (996 aa)
zraRSigma54 specific transcriptional regulator, Fis family ZraR - like protein. (318 aa)
AGA34529.1Sigma54 specific transcriptional regulator, Fis family - like protein. (448 aa)
AGA34587.1Sigma54 specific transcriptional regulator with PAS sensor, Fis family. (464 aa)
AGA34599.1Sensory box protein. (150 aa)
AGA34633.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (1086 aa)
yfgF-2Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (688 aa)
AGA34823.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (781 aa)
AGA34979.1Beta-lactamase related protein. (316 aa)
flbDSigma-54 dependent transcriptional regulator. (496 aa)
AGA35160.1Hypothetical protein. (101 aa)
AGA35322.1Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). (252 aa)
AGA35471.1Two component transcriptional regulator, LuxR family. (212 aa)
Your Current Organism:
Thioalkalivibrio nitratireducens
NCBI taxonomy Id: 1255043
Other names: T. nitratireducens DSM 14787, Thioalkalivibrio nitratireducens ALEN 2, Thioalkalivibrio nitratireducens DSM 14787, Thioalkalivibrio nitratireducens str. DSM 14787, Thioalkalivibrio nitratireducens strain DSM 14787
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