Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGA32140.1 | amtB | TVNIR_0435 | TVNIR_0436 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | Ammonium transporter. | 0.999 |
| AGA32140.1 | glnD | TVNIR_0435 | TVNIR_1974 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | [Protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. | 0.739 |
| AGA32140.1 | ntrB | TVNIR_0435 | TVNIR_3736 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | Nitrogen regulation protein NR(II). | 0.838 |
| AGA32142.1 | amtB | TVNIR_0437 | TVNIR_0436 | ABC transporter related protein. | Ammonium transporter. | 0.428 |
| AGA32142.1 | ybbM | TVNIR_0437 | TVNIR_0438 | ABC transporter related protein. | YbbM seven transmembrane helix protein. | 0.990 |
| AGA32257.1 | AGA35366.1 | TVNIR_0555 | TVNIR_3738 | Hypothetical protein. | Hypothetical protein. | 0.933 |
| AGA34128.1 | amtB | TVNIR_2485 | TVNIR_0436 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | Ammonium transporter. | 0.998 |
| AGA34128.1 | glnD | TVNIR_2485 | TVNIR_1974 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | [Protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. | 0.971 |
| AGA34128.1 | ntrB | TVNIR_2485 | TVNIR_3736 | Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. | Nitrogen regulation protein NR(II). | 0.983 |
| AGA34616.1 | AGA34617.1 | TVNIR_2979 | TVNIR_2980 | Putative nitrogen regulatory protein P-II. | Putative sodium-dependent bicarbonate transporter. | 0.949 |
| AGA34616.1 | amtB | TVNIR_2979 | TVNIR_0436 | Putative nitrogen regulatory protein P-II. | Ammonium transporter. | 0.946 |
| AGA34616.1 | cmpR | TVNIR_2979 | TVNIR_2978 | Putative nitrogen regulatory protein P-II. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.604 |
| AGA34616.1 | glnD | TVNIR_2979 | TVNIR_1974 | Putative nitrogen regulatory protein P-II. | [Protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. | 0.421 |
| AGA34616.1 | ntrB | TVNIR_2979 | TVNIR_3736 | Putative nitrogen regulatory protein P-II. | Nitrogen regulation protein NR(II). | 0.466 |
| AGA34617.1 | AGA34616.1 | TVNIR_2980 | TVNIR_2979 | Putative sodium-dependent bicarbonate transporter. | Putative nitrogen regulatory protein P-II. | 0.949 |
| AGA34617.1 | cmpR | TVNIR_2980 | TVNIR_2978 | Putative sodium-dependent bicarbonate transporter. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.642 |
| AGA35365.1 | AGA35366.1 | TVNIR_3737 | TVNIR_3738 | Hypothetical protein. | Hypothetical protein. | 0.625 |
| AGA35365.1 | glnG | TVNIR_3737 | TVNIR_3735 | Hypothetical protein. | Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. | 0.561 |
| AGA35365.1 | ntrB | TVNIR_3737 | TVNIR_3736 | Hypothetical protein. | Nitrogen regulation protein NR(II). | 0.627 |
| AGA35365.1 | ygdH-2 | TVNIR_3737 | TVNIR_3739 | Hypothetical protein. | DNA processing protein A; Belongs to the LOG family. | 0.625 |
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