STRINGSTRING
AGA31821.1 AGA31821.1 AGA32408.1 AGA32408.1 AGA32440.1 AGA32440.1 AGA33019.1 AGA33019.1 AGA33523.1 AGA33523.1 AGA33524.1 AGA33524.1 AGA33525.1 AGA33525.1 AGA33526.1 AGA33526.1 AGA33527.1 AGA33527.1 AGA33528.1 AGA33528.1 selU selU yjbB yjbB AGA33696.1 AGA33696.1 AGA34035.1 AGA34035.1 AGA34036.1 AGA34036.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGA31821.1Small multidrug efflux protein - like protein. (147 aa)
AGA32408.1Protein of unknown function DUF218. (90 aa)
AGA32440.1Hypothetical protein. (214 aa)
AGA33019.1Mn2+dependent serine/threonine protein kinase; Ortholog of Bordetella pertussis (BX470248) BP2792. (226 aa)
AGA33523.1Putative signal-transduction protein with CBS domains. (137 aa)
AGA33524.1Nitrogen regulatory protein P-II. (115 aa)
AGA33525.1Protein of unknown function DUF1538. (504 aa)
AGA33526.1Hypothetical protein. (122 aa)
AGA33527.1Protein of unknown function DUF1538. (499 aa)
AGA33528.1Hypothetical protein. (83 aa)
selUSelenophosphate-dependent tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. (383 aa)
yjbBSodium-dependent phosphate transporter. (618 aa)
AGA33696.1Hypothetical protein. (102 aa)
AGA34035.1Ferredoxin reductase. (156 aa)
AGA34036.1Ferredoxin reductase. (91 aa)
Your Current Organism:
Thioalkalivibrio nitratireducens
NCBI taxonomy Id: 1255043
Other names: T. nitratireducens DSM 14787, Thioalkalivibrio nitratireducens ALEN 2, Thioalkalivibrio nitratireducens DSM 14787, Thioalkalivibrio nitratireducens str. DSM 14787, Thioalkalivibrio nitratireducens strain DSM 14787
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