Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGA31885.1 | lspA | TVNIR_0172 | TVNIR_0169 | Hypothetical protein. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.445 |
| AGA31885.1 | yaaD | TVNIR_0172 | TVNIR_0170 | Hypothetical protein. | FKBP-type peptidyl-prolyl cis-trans isomerase SlpA. | 0.445 |
| AGA32083.1 | AGA32084.1 | TVNIR_0375 | TVNIR_0376 | Nucleotidyl transferase. | Aminoglycoside phosphotransferase; COG3178. | 0.994 |
| AGA32083.1 | ftsN | TVNIR_0375 | TVNIR_3556 | Nucleotidyl transferase. | Cell division protein. | 0.418 |
| AGA32083.1 | murA | TVNIR_0375 | TVNIR_2629 | Nucleotidyl transferase. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.808 |
| AGA32083.1 | murB | TVNIR_0375 | TVNIR_2602 | Nucleotidyl transferase. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.901 |
| AGA32083.1 | murC | TVNIR_0375 | TVNIR_2603 | Nucleotidyl transferase. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.801 |
| AGA32084.1 | AGA32083.1 | TVNIR_0376 | TVNIR_0375 | Aminoglycoside phosphotransferase; COG3178. | Nucleotidyl transferase. | 0.994 |
| AGA32084.1 | ampG4 | TVNIR_0376 | TVNIR_3758 | Aminoglycoside phosphotransferase; COG3178. | AmpG permease. | 0.643 |
| AGA32084.1 | nagZ | TVNIR_0376 | TVNIR_1608 | Aminoglycoside phosphotransferase; COG3178. | Beta N-acetyl-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. | 0.944 |
| AGA32900.1 | dacB | TVNIR_1227 | TVNIR_3208 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase. | 0.550 |
| AGA32900.1 | mrdA | TVNIR_1227 | TVNIR_2204 | Hypothetical protein. | Penicillin-binding protein 2 (PBP-2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.530 |
| AGA32900.1 | nagZ | TVNIR_1227 | TVNIR_1608 | Hypothetical protein. | Beta N-acetyl-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. | 0.424 |
| AGA33858.1 | dacC | TVNIR_2202 | TVNIR_2200 | Membrane-bound lytic murein transglycosylase B precursor. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.629 |
| AGA33858.1 | mrdA | TVNIR_2202 | TVNIR_2204 | Membrane-bound lytic murein transglycosylase B precursor. | Penicillin-binding protein 2 (PBP-2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.889 |
| AGA33858.1 | mrdB | TVNIR_2202 | TVNIR_2203 | Membrane-bound lytic murein transglycosylase B precursor. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.863 |
| AGA33858.1 | mreD | TVNIR_2202 | TVNIR_2689 | Membrane-bound lytic murein transglycosylase B precursor. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.428 |
| AGA33858.1 | rlpA | TVNIR_2202 | TVNIR_2201 | Membrane-bound lytic murein transglycosylase B precursor. | Rare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.764 |
| AGA33858.1 | ybeD | TVNIR_2202 | TVNIR_2198 | Membrane-bound lytic murein transglycosylase B precursor. | Putative lipoate regulatory protein YbeD; Belongs to the UPF0250 family. | 0.523 |
| AGA34291.1 | AGA34292.1 | TVNIR_2650 | TVNIR_2651 | Thioredoxin; Belongs to the thioredoxin family. | N-terminal domain of Lon protease - like uncharacterized protein. | 0.662 |
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