(11 nodes) Mixed, incl. Primosome complex, and DDE transposase retroviral integrase sub-family network (Flammeovirgaceae bacterium 311)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AHM59299.1	COG1484 DNA replication protein. (239 aa)
	AHM59300.1	COG4584 Transposase and inactivated derivatives. (510 aa)
	AHM60919.1	COG1484 DNA replication protein. (239 aa)
	AHM60920.1	COG4584 Transposase and inactivated derivatives. (510 aa)
	AHM62341.1	COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria). (200 aa)
	AHM62342.1	COG4584 Transposase and inactivated derivatives. (510 aa)
	AHM62343.1	COG1484 DNA replication protein. (239 aa)
	AHM62344.1	Hypothetical protein. (93 aa)
	AHM62345.1	Hypothetical protein. (110 aa)
	AHM63184.1	COG1484 DNA replication protein. (239 aa)
	AHM63185.1	COG4584 Transposase and inactivated derivatives. (510 aa)

Your Current Organism:

Flammeovirgaceae bacterium 311

NCBI taxonomy Id: 1257021
Other names: F. bacterium 311

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHM59299.1	AHM59300.1	D770_05160	D770_05165	COG1484 DNA replication protein.	COG4584 Transposase and inactivated derivatives.	0.956
AHM59299.1	AHM60920.1	D770_05160	D770_13330	COG1484 DNA replication protein.	COG4584 Transposase and inactivated derivatives.	0.830
AHM59299.1	AHM62342.1	D770_05160	D770_20465	COG1484 DNA replication protein.	COG4584 Transposase and inactivated derivatives.	0.830
AHM59299.1	AHM63185.1	D770_05160	D770_24700	COG1484 DNA replication protein.	COG4584 Transposase and inactivated derivatives.	0.835
AHM59300.1	AHM59299.1	D770_05165	D770_05160	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.956
AHM59300.1	AHM60919.1	D770_05165	D770_13325	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.830
AHM59300.1	AHM62343.1	D770_05165	D770_20470	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.830
AHM59300.1	AHM63184.1	D770_05165	D770_24695	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.827
AHM60919.1	AHM59300.1	D770_13325	D770_05165	COG1484 DNA replication protein.	COG4584 Transposase and inactivated derivatives.	0.830
AHM60919.1	AHM60920.1	D770_13325	D770_13330	COG1484 DNA replication protein.	COG4584 Transposase and inactivated derivatives.	0.956
AHM60919.1	AHM62342.1	D770_13325	D770_20465	COG1484 DNA replication protein.	COG4584 Transposase and inactivated derivatives.	0.830
AHM60919.1	AHM63185.1	D770_13325	D770_24700	COG1484 DNA replication protein.	COG4584 Transposase and inactivated derivatives.	0.835
AHM60920.1	AHM59299.1	D770_13330	D770_05160	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.830
AHM60920.1	AHM60919.1	D770_13330	D770_13325	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.956
AHM60920.1	AHM62343.1	D770_13330	D770_20470	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.830
AHM60920.1	AHM63184.1	D770_13330	D770_24695	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.827
AHM62341.1	AHM62342.1	D770_20460	D770_20465	COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria).	COG4584 Transposase and inactivated derivatives.	0.447
AHM62341.1	AHM62343.1	D770_20460	D770_20470	COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria).	COG1484 DNA replication protein.	0.431
AHM62342.1	AHM59299.1	D770_20465	D770_05160	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.830
AHM62342.1	AHM60919.1	D770_20465	D770_13325	COG4584 Transposase and inactivated derivatives.	COG1484 DNA replication protein.	0.830