(23 nodes) Helicase superfamily 1/2, ATP-binding domain network (Flammeovirgaceae bacterium 311)

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second shell of interactors

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a 3D structure is known or predicted

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Your Input:
	AHM58875.1	COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (370 aa)
	AHM63584.1	DNA/RNA helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (452 aa)
	AHM59140.1	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (441 aa)
	AHM59165.1	COG1201 Lhr-like helicases. (833 aa)
	AHM59470.1	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. (414 aa)
	AHM59933.1	COG0514 Superfamily II DNA helicase. (727 aa)
	AHM60103.1	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases. (831 aa)
	secA	Protein translocase subunit seca; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (1128 aa)
	uvrB	Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (676 aa)
	AHM60976.1	COG0514 Superfamily II DNA helicase. (686 aa)
	mfd	Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1117 aa)
	AHM61460.1	Snf2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. (985 aa)
	recG	ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (699 aa)
	AHM61978.1	DNA/RNA helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (461 aa)
	AHM62465.1	COG0514 Superfamily II DNA helicase. (640 aa)
	AHM62827.1	SNF2-like protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. (1144 aa)
	AHM63221.1	COG0514 Superfamily II DNA helicase. (1608 aa)
	AHM63229.1	COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases. (1019 aa)
	AHM63230.1	COG2852 Uncharacterized protein conserved in bacteria. (1126 aa)
	priA	Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (840 aa)
	AHM63253.1	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. (434 aa)
	AHM63546.1	COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (562 aa)
	AHM58463.1	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (380 aa)

Your Current Organism:

Flammeovirgaceae bacterium 311

NCBI taxonomy Id: 1257021
Other names: F. bacterium 311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHM58463.1	AHM60103.1	D770_00945	D770_09230	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	0.453
AHM58875.1	AHM60103.1	D770_03040	D770_09230	COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	0.453
AHM58875.1	AHM63546.1	D770_03040	D770_26515	COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	0.908
AHM59140.1	AHM60103.1	D770_04365	D770_09230	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	0.453
AHM59165.1	AHM63221.1	D770_04490	D770_24880	COG1201 Lhr-like helicases.	COG0514 Superfamily II DNA helicase.	0.464
AHM59470.1	AHM60103.1	D770_06035	D770_09230	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases.	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	0.453
AHM59933.1	AHM61460.1	D770_08350	D770_16030	COG0514 Superfamily II DNA helicase.	Snf2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.	0.463
AHM59933.1	AHM62827.1	D770_08350	D770_22910	COG0514 Superfamily II DNA helicase.	SNF2-like protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.	0.426
AHM59933.1	AHM63221.1	D770_08350	D770_24880	COG0514 Superfamily II DNA helicase.	COG0514 Superfamily II DNA helicase.	0.601
AHM60103.1	AHM58463.1	D770_09230	D770_00945	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	0.453
AHM60103.1	AHM58875.1	D770_09230	D770_03040	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	0.453
AHM60103.1	AHM59140.1	D770_09230	D770_04365	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	0.453
AHM60103.1	AHM59470.1	D770_09230	D770_06035	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases.	0.453
AHM60103.1	AHM61978.1	D770_09230	D770_18635	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	DNA/RNA helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	0.453
AHM60103.1	AHM63253.1	D770_09230	D770_25040	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases.	0.453
AHM60103.1	AHM63546.1	D770_09230	D770_26515	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	0.453
AHM60103.1	AHM63584.1	D770_09230	D770_26705	ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.	DNA/RNA helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.	0.453
AHM60976.1	AHM61460.1	D770_13610	D770_16030	COG0514 Superfamily II DNA helicase.	Snf2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.	0.441
AHM60976.1	AHM62827.1	D770_13610	D770_22910	COG0514 Superfamily II DNA helicase.	SNF2-like protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.	0.418
AHM60976.1	AHM63221.1	D770_13610	D770_24880	COG0514 Superfamily II DNA helicase.	COG0514 Superfamily II DNA helicase.	0.609