STRINGSTRING
AHM59938.1 AHM59938.1 AHM63649.1 AHM63649.1 AHM63613.1 AHM63613.1 AHM63603.1 AHM63603.1 AHM63584.1 AHM63584.1 AHM63546.1 AHM63546.1 AHM63469.1 AHM63469.1 ychF ychF AHM63426.1 AHM63426.1 AHM63422.1 AHM63422.1 AHM63419.1 AHM63419.1 AHM63350.1 AHM63350.1 AHM63347.1 AHM63347.1 AHM63337.1 AHM63337.1 AHM63296.1 AHM63296.1 AHM63253.1 AHM63253.1 priA priA AHM63242.1 AHM63242.1 AHM63230.1 AHM63230.1 AHM63229.1 AHM63229.1 AHM63221.1 AHM63221.1 AHM63184.1 AHM63184.1 AHM63117.1 AHM63117.1 AHM63114.1 AHM63114.1 AHM62980.1 AHM62980.1 AHM62975.1 AHM62975.1 AHM62950.1 AHM62950.1 pstB pstB AHM62896.1 AHM62896.1 lolD-2 lolD-2 AHM62874.1 AHM62874.1 AHM62852.1 AHM62852.1 AHM62850.1 AHM62850.1 AHM62827.1 AHM62827.1 AHM62777.1 AHM62777.1 AHM62671.1 AHM62671.1 aroK aroK lpxK lpxK AHM62489.1 AHM62489.1 AHM62465.1 AHM62465.1 purA purA clpX clpX lepA lepA AHM62399.1 AHM62399.1 AHM62389.1 AHM62389.1 AHM62357.1 AHM62357.1 AHM62350.1 AHM62350.1 AHM62308.1 AHM62308.1 AHM62211.1 AHM62211.1 hslU hslU lon lon AHM62132.1 AHM62132.1 AHM62129.1 AHM62129.1 AHM62123.1 AHM62123.1 dnaA dnaA AHM62085.1 AHM62085.1 AHM62077.1 AHM62077.1 dnaX dnaX recA recA AHM62013.1 AHM62013.1 AHM61994.1 AHM61994.1 AHM61991.1 AHM61991.1 AHM61978.1 AHM61978.1 der der era era AHM61927.1 AHM61927.1 AHM61865.1 AHM61865.1 AHM61845.1 AHM61845.1 AHM61842.1 AHM61842.1 AHM61836.1 AHM61836.1 recF recF AHM61752.1 AHM61752.1 AHM61701.1 AHM61701.1 AHM61688.1 AHM61688.1 AHM61662.1 AHM61662.1 tdk tdk AHM61633.1 AHM61633.1 AHM61631.1 AHM61631.1 AHM61617.1 AHM61617.1 AHM61596.1 AHM61596.1 AHM61548.1 AHM61548.1 recG recG AHM61517.1 AHM61517.1 AHM61460.1 AHM61460.1 AHM61386.1 AHM61386.1 infB infB AHM61276.1 AHM61276.1 mutS mutS mfd mfd AHM61225.1 AHM61225.1 AHM61176.1 AHM61176.1 AHM61129.1 AHM61129.1 ruvB ruvB AHM61083.1 AHM61083.1 AHM61072.1 AHM61072.1 AHM61062.1 AHM61062.1 atpA atpA radA radA AHM61015.1 AHM61015.1 AHM60976.1 AHM60976.1 uvrB uvrB AHM60936.1 AHM60936.1 hflX hflX AHM60928.1 AHM60928.1 AHM60916.1 AHM60916.1 clpB clpB AHM60802.1 AHM60802.1 AHM60798.1 AHM60798.1 AHM60739.1 AHM60739.1 AHM60736.1 AHM60736.1 coaE coaE prfC prfC ftsY ftsY rho rho AHM60624.1 AHM60624.1 AHM60583.1 AHM60583.1 AHM60502.1 AHM60502.1 secA secA atpD atpD AHM60447.1 AHM60447.1 ftsH ftsH obg obg adk adk AHM60360.1 AHM60360.1 AHM60334.1 AHM60334.1 AHM60270.1 AHM60270.1 AHM60241.1 AHM60241.1 AHM60234.1 AHM60234.1 AHM60221.1 AHM60221.1 AHM60217.1 AHM60217.1 tuf tuf fusA fusA AHM60103.1 AHM60103.1 AHM60003.1 AHM60003.1 smc smc AHM59933.1 AHM59933.1 AHM59922.1 AHM59922.1 AHM59920.1 AHM59920.1 AHM59916.1 AHM59916.1 AHM59909.1 AHM59909.1 AHM59904.1 AHM59904.1 rsgA rsgA engB engB AHM59839.1 AHM59839.1 AHM59821.1 AHM59821.1 AHM59793.1 AHM59793.1 cmk cmk pyrG pyrG AHM59768.1 AHM59768.1 AHM59715.1 AHM59715.1 icmF icmF AHM59604.1 AHM59604.1 bioD bioD AHM59537.1 AHM59537.1 mutS2 mutS2 AHM59525.1 AHM59525.1 AHM59519.1 AHM59519.1 AHM59485.1 AHM59485.1 AHM59470.1 AHM59470.1 AHM59438.1 AHM59438.1 AHM59384.1 AHM59384.1 AHM59299.1 AHM59299.1 AHM59196.1 AHM59196.1 lolD lolD AHM59165.1 AHM59165.1 AHM59151.1 AHM59151.1 AHM59141.1 AHM59141.1 AHM59140.1 AHM59140.1 AHM59083.1 AHM59083.1 miaA miaA ffh ffh AHM58989.1 AHM58989.1 AHM58961.1 AHM58961.1 AHM58914.1 AHM58914.1 AHM58910.1 AHM58910.1 AHM58878.1 AHM58878.1 AHM58875.1 AHM58875.1 AHM58874.1 AHM58874.1 AHM58862.1 AHM58862.1 AHM58815.1 AHM58815.1 mnmE mnmE AHM58807.1 AHM58807.1 AHM58731.1 AHM58731.1 AHM58683.1 AHM58683.1 AHM58660.1 AHM58660.1 AHM58638.1 AHM58638.1 AHM58634.1 AHM58634.1 AHM58632.1 AHM58632.1 ureG ureG AHM58594.1 AHM58594.1 AHM58525.1 AHM58525.1 AHM58463.1 AHM58463.1 AHM58425.1 AHM58425.1 AHM58415.1 AHM58415.1 AHM58413.1 AHM58413.1 AHM58410.1 AHM58410.1 AHM58397.1 AHM58397.1 AHM58356.1 AHM58356.1 AHM58355.1 AHM58355.1 AHM58352.1 AHM58352.1 AHM58335.1 AHM58335.1 AHM58328.1 AHM58328.1 AHM58320.1 AHM58320.1 AHM58290.1 AHM58290.1 AHM58283.1 AHM58283.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AHM59938.1Superfamily i DNA helicase; COG0606 Predicted ATPase with chaperone activity. (1359 aa)
AHM63649.1ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component. (255 aa)
AHM63613.1Putative sulfotransferase protein. (292 aa)
AHM63603.1COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (741 aa)
AHM63584.1DNA/RNA helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (452 aa)
AHM63546.1COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (562 aa)
AHM63469.1COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (642 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (364 aa)
AHM63426.1COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). (1116 aa)
AHM63422.1Hypothetical protein; COG3893 Inactivated superfamily I helicase. (983 aa)
AHM63419.1ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; COG1132 ABC-type multidrug transport system, ATPase and permease components. (578 aa)
AHM63350.1Hypothetical protein; COG0457 FOG: TPR repeat. (1297 aa)
AHM63347.1ABC transporter related protein; COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component. (234 aa)
AHM63337.1DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (552 aa)
AHM63296.1COG1192 ATPases involved in chromosome partitioning. (266 aa)
AHM63253.1DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. (434 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (840 aa)
AHM63242.1Chromosome partitioning ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (363 aa)
AHM63230.1COG2852 Uncharacterized protein conserved in bacteria. (1126 aa)
AHM63229.1COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases. (1019 aa)
AHM63221.1COG0514 Superfamily II DNA helicase. (1608 aa)
AHM63184.1COG1484 DNA replication protein. (239 aa)
AHM63117.1Fis family transcriptional regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (462 aa)
AHM63114.1Phosphonate-transporting ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (221 aa)
AHM62980.1COG1131 ABC-type multidrug transport system, ATPase component. (284 aa)
AHM62975.1Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (696 aa)
AHM62950.1Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (714 aa)
pstBPhosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (253 aa)
AHM62896.1DNA/RNA helicase; COG1112 Superfamily I DNA and RNA helicases and helicase subunits. (1563 aa)
lolD-2Phosphonate-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (231 aa)
AHM62874.1COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (226 aa)
AHM62852.1Phosphonate-transporting ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (225 aa)
AHM62850.1Two component, sigma54 specific, transcriptional regulator, Fis family protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (451 aa)
AHM62827.1SNF2-like protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. (1144 aa)
AHM62777.1DNA mismatch repair protein MutS domain-containing protein; COG0249 Mismatch repair ATPase (MutS family); Belongs to the DNA mismatch repair MutS family. (616 aa)
AHM62671.1Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component. (307 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (176 aa)
lpxKTetraacyldisaccharide 4''-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (355 aa)
AHM62489.1COG1131 ABC-type multidrug transport system, ATPase component. (232 aa)
AHM62465.1COG0514 Superfamily II DNA helicase. (640 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (429 aa)
clpXATP-dependent clp protease ATP-binding subunit clpx; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (412 aa)
lepAGTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (595 aa)
AHM62399.1Type III restriction enzyme, res subunit; COG1112 Superfamily I DNA and RNA helicases and helicase subunits. (648 aa)
AHM62389.1Cobalamin synthesis protein P47K; COG0523 Putative GTPases (G3E family). (326 aa)
AHM62357.1Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component. (309 aa)
AHM62350.1Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component. (237 aa)
AHM62308.1Hypothetical protein. (496 aa)
AHM62211.1COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (790 aa)
hslUATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (470 aa)
lonATP-dependent protease la; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (826 aa)
AHM62132.1ABC transporter-like protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components. (354 aa)
AHM62129.1LAO/AO transport system ATPase; COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family. (342 aa)
AHM62123.1COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component. (264 aa)
dnaAChromosomal replication initiator protein dnaa; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (443 aa)
AHM62085.1Putative two component sigma-54 specific transcriptional regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (444 aa)
AHM62077.1Fis family transcriptional regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (452 aa)
dnaXDNA polymerase III subunits tau/gamma; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (388 aa)
recAReca protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (342 aa)
AHM62013.1COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (551 aa)
AHM61994.1COG1239 Mg-chelatase subunit ChlI. (515 aa)
AHM61991.1PhoH family protein; COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH. (454 aa)
AHM61978.1DNA/RNA helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (461 aa)
derRibosome-associated GTPase enga; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (435 aa)
eraGTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (322 aa)
AHM61927.1COG0572 Uridine kinase; Belongs to the uridine kinase family. (205 aa)
AHM61865.1Hypothetical protein. (231 aa)
AHM61845.1Mg chelatase-like protein; COG0606 Predicted ATPase with chaperone activity. (513 aa)
AHM61842.1COG1132 ABC-type multidrug transport system, ATPase and permease components. (610 aa)
AHM61836.1COG2812 DNA polymerase III, gamma/tau subunits. (403 aa)
recFrecF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (376 aa)
AHM61752.1DNA mismatch repair protein MutS domain-containing protein; COG0249 Mismatch repair ATPase (MutS family); Belongs to the DNA mismatch repair MutS family. (633 aa)
AHM61701.1ATPase; COG1222 ATP-dependent 26S proteasome regulatory subunit. (1674 aa)
AHM61688.1COG1132 ABC-type multidrug transport system, ATPase and permease components. (599 aa)
AHM61662.1SMC domain-containing protein; COG0419 ATPase involved in DNA repair. (1028 aa)
tdkCOG1435 Thymidine kinase. (199 aa)
AHM61633.1COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member. (462 aa)
AHM61631.1Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (963 aa)
AHM61617.1Hypothetical protein. (2127 aa)
AHM61596.1Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (777 aa)
AHM61548.1ATP-binding region ATPase domain-containing protein; COG0515 Serine/threonine protein kinase. (1756 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (699 aa)
AHM61517.1Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (967 aa)
AHM61460.1Snf2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. (985 aa)
AHM61386.1ABC transporter ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. (615 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (1171 aa)
AHM61276.1COG0714 MoxR-like ATPases. (336 aa)
mutSDNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (875 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1117 aa)
AHM61225.1ABC transporter ATPase; COG1137 ABC-type (unclassified) transport system, ATPase component. (243 aa)
AHM61176.1ABC transporter-like protein; COG1129 ABC-type sugar transport system, ATPase component. (516 aa)
AHM61129.1COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component. (258 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (345 aa)
AHM61083.1Microtubule-severing ATPase; COG0457 FOG: TPR repeat; Belongs to the AAA ATPase family. (434 aa)
AHM61072.1COG3172 Predicted ATPase/kinase involved in NAD metabolism. (171 aa)
AHM61062.1ATPase AAA; COG0714 MoxR-like ATPases. (322 aa)
atpAProton translocating ATP synthase, F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (526 aa)
radADNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (460 aa)
AHM61015.1COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily. (347 aa)
AHM60976.1COG0514 Superfamily II DNA helicase. (686 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (676 aa)
AHM60936.1COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (786 aa)
hflXGTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (406 aa)
AHM60928.1Hypothetical protein; COG1066 Predicted ATP-dependent serine protease. (368 aa)
AHM60916.1COG1401 GTPase subunit of restriction endonuclease. (639 aa)
clpBATP-dependent chaperone clpb; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (873 aa)
AHM60802.1ABC transporter; COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (547 aa)
AHM60798.1Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (700 aa)
AHM60739.1COG1132 ABC-type multidrug transport system, ATPase and permease components. (589 aa)
AHM60736.1COG1132 ABC-type multidrug transport system, ATPase and permease components. (594 aa)
coaEdephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (218 aa)
prfCPeptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (536 aa)
ftsYSignal recognition particle-docking protein ftsy; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (328 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (699 aa)
AHM60624.1ATPase; COG0714 MoxR-like ATPases. (327 aa)
AHM60583.1COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (430 aa)
AHM60502.1COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (239 aa)
secAProtein translocase subunit seca; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (1128 aa)
atpDATP synthase F1 subcomplex subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (501 aa)
AHM60447.1COG4152 ABC-type uncharacterized transport system, ATPase component. (311 aa)
ftsHMembrane protease ftsh catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (687 aa)
obgGTP-binding protein obg/cgta; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (334 aa)
adkAdenylate kinase-like kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (192 aa)
AHM60360.1HRDC domain-containing protein; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member. (833 aa)
AHM60334.1ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component. (299 aa)
AHM60270.1Phage/plasmid primase, P4 family protein; COG3378 Predicted ATPase. (507 aa)
AHM60241.1Hypothetical protein; COG0464 ATPases of the AAA+ class. (520 aa)
AHM60234.1COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. (851 aa)
AHM60221.1COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase. (427 aa)
AHM60217.1COG0194 Guanylate kinase. (200 aa)
tufElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (395 aa)
fusAElongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. (705 aa)
AHM60103.1ATP-dependent helicase HrpB; COG1643 HrpA-like helicases. (831 aa)
AHM60003.1PvdS. (263 aa)
smcChromosome segregation protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1193 aa)
AHM59933.1COG0514 Superfamily II DNA helicase. (727 aa)
AHM59922.1adenylyLSUlfate kinase; Catalyzes the synthesis of activated sulfate. (170 aa)
AHM59920.1Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (413 aa)
AHM59916.1ABC transporter ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (422 aa)
AHM59909.1Sulfotransferase superfamily protein. (303 aa)
AHM59904.1Hypothetical protein. (264 aa)
rsgAGTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (313 aa)
engBRibosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (200 aa)
AHM59839.1COG1131 ABC-type multidrug transport system, ATPase component. (1033 aa)
AHM59821.1COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins. (838 aa)
AHM59793.1COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (628 aa)
cmkCOG0283 Cytidylate kinase. (233 aa)
pyrGCTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (541 aa)
AHM59768.1Cell division ATPase; COG2884 Predicted ATPase involved in cell division. (236 aa)
AHM59715.1Phoh family protein; COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. (329 aa)
icmFmethylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1133 aa)
AHM59604.1Two component sigma-54 specific Fis family transcriptional regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (453 aa)
bioDDethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (201 aa)
AHM59537.1COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member. (460 aa)
mutS2Smr protein/MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (799 aa)
AHM59525.1COG1131 ABC-type multidrug transport system, ATPase component. (208 aa)
AHM59519.1Hypothetical protein; COG0802 Predicted ATPase or kinase. (146 aa)
AHM59485.1Gliding motility-associated ABC transporter ATP-binding subunit GldA; COG1131 ABC-type multidrug transport system, ATPase component. (308 aa)
AHM59470.1DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. (414 aa)
AHM59438.1DNA/RNA helicase; COG0210 Superfamily I DNA and RNA helicases. (742 aa)
AHM59384.1Two component, sigma54 specific, transcriptional regulator, fis family protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (387 aa)
AHM59299.1COG1484 DNA replication protein. (239 aa)
AHM59196.16-phosphogluconate dehydrogenase; COG3265 Gluconate kinase; Belongs to the 6-phosphogluconate dehydrogenase family. (631 aa)
lolDABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (218 aa)
AHM59165.1COG1201 Lhr-like helicases. (833 aa)
AHM59151.1FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component. (252 aa)
AHM59141.1Hypothetical protein; COG4639 Predicted kinase. (149 aa)
AHM59140.1DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (441 aa)
AHM59083.1COG1253 Hemolysins and related proteins containing CBS domains. (386 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (305 aa)
ffhSignal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (440 aa)
AHM58989.1Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (508 aa)
AHM58961.1COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain. (423 aa)
AHM58914.1COG1132 ABC-type multidrug transport system, ATPase and permease components. (197 aa)
AHM58910.1COG1466 DNA polymerase III, delta subunit. (355 aa)
AHM58878.1ABC transporter; COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (538 aa)
AHM58875.1COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (370 aa)
AHM58874.1PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. (642 aa)
AHM58862.1Metal dependent phosphohydrolase; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase. (387 aa)
AHM58815.1COG1121 ABC-type Mn/Zn transport systems, ATPase component. (262 aa)
mnmEtRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (461 aa)
AHM58807.1COG1131 ABC-type multidrug transport system, ATPase component. (306 aa)
AHM58731.1Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component. (313 aa)
AHM58683.1Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component. (308 aa)
AHM58660.1COG1192 ATPases involved in chromosome partitioning. (256 aa)
AHM58638.1ABC transporter ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (422 aa)
AHM58634.1COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (428 aa)
AHM58632.1COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (800 aa)
ureGUrease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (250 aa)
AHM58594.1ATPase; COG0714 MoxR-like ATPases. (281 aa)
AHM58525.1COG1132 ABC-type multidrug transport system, ATPase and permease components. (592 aa)
AHM58463.1DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (380 aa)
AHM58425.1ABC-type transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (566 aa)
AHM58415.1Sulfotransferase family protein; COG0457 FOG: TPR repeat. (266 aa)
AHM58413.1Hypothetical protein. (260 aa)
AHM58410.1COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (782 aa)
AHM58397.1COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA. (499 aa)
AHM58356.1COG1132 ABC-type multidrug transport system, ATPase and permease components. (590 aa)
AHM58355.1Sulfotransferase. (298 aa)
AHM58352.1COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily. (349 aa)
AHM58335.1COG1428 Deoxynucleoside kinases. (220 aa)
AHM58328.1COG0714 MoxR-like ATPases. (331 aa)
AHM58320.1COG1132 ABC-type multidrug transport system, ATPase and permease components. (610 aa)
AHM58290.1Helicase, RecD/TraA family protein; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member. (832 aa)
AHM58283.1GTP-binding protein TypA; COG1217 Predicted membrane GTPase involved in stress response. (604 aa)
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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