Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHM58538.1 | AHM61398.1 | D770_01320 | D770_15720 | DNA glycosylase; COG3663 G:T/U mismatch-specific DNA glycosylase. | COG0708 Exonuclease III. | 0.649 |
| AHM58581.1 | AHM61398.1 | D770_01535 | D770_15720 | COG2094 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family. | COG0708 Exonuclease III. | 0.602 |
| AHM59164.1 | AHM61398.1 | D770_04485 | D770_15720 | COG1793 ATP-dependent DNA ligase. | COG0708 Exonuclease III. | 0.740 |
| AHM59164.1 | ligA | D770_04485 | D770_00210 | COG1793 ATP-dependent DNA ligase. | DNA ligase, nad-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.923 |
| AHM59164.1 | polA | D770_04485 | D770_15130 | COG1793 ATP-dependent DNA ligase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.927 |
| AHM61226.1 | polA | D770_14860 | D770_15130 | single-stranded-DNA-specific exonuclease RecJ; COG0608 Single-stranded DNA-specific exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.553 |
| AHM61241.1 | AHM61398.1 | D770_14935 | D770_15720 | DNA-(apurinic or apyrimidinic site) lyase; COG0177 Predicted EndoIII-related endonuclease. | COG0708 Exonuclease III. | 0.842 |
| AHM61241.1 | AHM62191.1 | D770_14935 | D770_19710 | DNA-(apurinic or apyrimidinic site) lyase; COG0177 Predicted EndoIII-related endonuclease. | HhH-GPD family protein; COG0177 Predicted EndoIII-related endonuclease. | 0.928 |
| AHM61241.1 | nth | D770_14935 | D770_16335 | DNA-(apurinic or apyrimidinic site) lyase; COG0177 Predicted EndoIII-related endonuclease. | Endonuclease iii; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.923 |
| AHM61241.1 | polA | D770_14935 | D770_15130 | DNA-(apurinic or apyrimidinic site) lyase; COG0177 Predicted EndoIII-related endonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.527 |
| AHM61284.1 | AHM61529.1 | D770_15150 | D770_16375 | COG2818 3-methyladenine DNA glycosylase. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.458 |
| AHM61284.1 | polA | D770_15150 | D770_15130 | COG2818 3-methyladenine DNA glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.535 |
| AHM61398.1 | AHM58538.1 | D770_15720 | D770_01320 | COG0708 Exonuclease III. | DNA glycosylase; COG3663 G:T/U mismatch-specific DNA glycosylase. | 0.649 |
| AHM61398.1 | AHM58581.1 | D770_15720 | D770_01535 | COG0708 Exonuclease III. | COG2094 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family. | 0.602 |
| AHM61398.1 | AHM59164.1 | D770_15720 | D770_04485 | COG0708 Exonuclease III. | COG1793 ATP-dependent DNA ligase. | 0.740 |
| AHM61398.1 | AHM61241.1 | D770_15720 | D770_14935 | COG0708 Exonuclease III. | DNA-(apurinic or apyrimidinic site) lyase; COG0177 Predicted EndoIII-related endonuclease. | 0.842 |
| AHM61398.1 | AHM61529.1 | D770_15720 | D770_16375 | COG0708 Exonuclease III. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.743 |
| AHM61398.1 | AHM62191.1 | D770_15720 | D770_19710 | COG0708 Exonuclease III. | HhH-GPD family protein; COG0177 Predicted EndoIII-related endonuclease. | 0.584 |
| AHM61398.1 | AHM62760.1 | D770_15720 | D770_22565 | COG0708 Exonuclease III. | DNA-3-methyladenine glycosidase; COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase. | 0.758 |
| AHM61398.1 | nth | D770_15720 | D770_16335 | COG0708 Exonuclease III. | Endonuclease iii; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.939 |
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