STRINGSTRING
ACA1_180170 ACA1_180170 ACA1_258700 ACA1_258700 ACA1_097800 ACA1_097800 ACA1_339940 ACA1_339940 ACA1_364250 ACA1_364250 ACA1_325110 ACA1_325110 ACA1_204440 ACA1_204440 ACA1_061690 ACA1_061690 ACA1_298790 ACA1_298790 ACA1_113910 ACA1_113910 ACA1_195230 ACA1_195230 ACA1_360300 ACA1_360300 ACA1_073070 ACA1_073070 ACA1_287750 ACA1_287750 ACA1_291020 ACA1_291020 ACA1_171650 ACA1_171650
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_180170RNA-binding domain-containing protein. (240 aa)
ACA1_258700Exosc8 protein. (278 aa)
ACA1_097800Ribonuclease II; Belongs to the RNR ribonuclease family. (964 aa)
ACA1_339940Tetratricopeptide repeat domain containing protein. (791 aa)
ACA1_3642503' exoribonuclease family, domain 1 domain containing protein. (524 aa)
ACA1_3251103'5' exonuclease domain containing protein. (317 aa)
ACA1_204440Uncharacterized protein. (986 aa)
ACA1_0616903' exoribonuclease family, domain 1 domain containing protein. (236 aa)
ACA1_2987903'5' exonuclease domain containing protein. (929 aa)
ACA1_113910Uncharacterized protein. (1345 aa)
ACA1_195230DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1400 aa)
ACA1_3603003' exoribonuclease family, domain 1 domain containing protein. (274 aa)
ACA1_073070Exosome component 3, putative. (233 aa)
ACA1_287750Sas10/Utp3/C1D family protein. (172 aa)
ACA1_291020Exosome complex exonuclease rrp41, putative. (205 aa)
ACA1_171650Exosome component 7, putative. (263 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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