STRINGSTRING
ACA1_373720 ACA1_373720 ACA1_097580 ACA1_097580 ACA1_288930 ACA1_288930 ACA1_171650 ACA1_171650 ACA1_289990 ACA1_289990 ACA1_287750 ACA1_287750 ACA1_073070 ACA1_073070 ACA1_360040 ACA1_360040 ACA1_158170 ACA1_158170 ACA1_266780 ACA1_266780 ACA1_201140 ACA1_201140 ACA1_199040 ACA1_199040 ACA1_298790 ACA1_298790 ACA1_266990 ACA1_266990 ACA1_204440 ACA1_204440 EIF6 EIF6 ACA1_204570 ACA1_204570 ACA1_325110 ACA1_325110 ACA1_066720 ACA1_066720 ACA1_216450 ACA1_216450 ACA1_131810 ACA1_131810 ACA1_037940 ACA1_037940 ACA1_364250 ACA1_364250 ACA1_037920 ACA1_037920 ACA1_290100 ACA1_290100 ACA1_258700 ACA1_258700 ACA1_261070 ACA1_261070
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_373720Exonuclease. (277 aa)
ACA1_097580Uncharacterized protein. (375 aa)
ACA1_288930Uncharacterized protein. (2103 aa)
ACA1_171650Exosome component 7, putative. (263 aa)
ACA1_289990Uncharacterized protein. (329 aa)
ACA1_287750Sas10/Utp3/C1D family protein. (172 aa)
ACA1_073070Exosome component 3, putative. (233 aa)
ACA1_360040Ribosomal protein S8e, putative. (259 aa)
ACA1_158170Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (541 aa)
ACA1_266780Ribosomal RNA large subunit methyltransferase J, putative. (777 aa)
ACA1_201140Uncharacterized protein. (219 aa)
ACA1_199040Pumiliofamily RNA binding repeat domain containing protein. (848 aa)
ACA1_2987903'5' exonuclease domain containing protein. (929 aa)
ACA1_266990Las1 family protein. (572 aa)
ACA1_204440Uncharacterized protein. (986 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (244 aa)
ACA1_204570Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (316 aa)
ACA1_3251103'5' exonuclease domain containing protein. (317 aa)
ACA1_066720Exonuclease, putative. (927 aa)
ACA1_216450Protein MAK16 homolog; Belongs to the MAK16 family. (285 aa)
ACA1_13181040S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (79 aa)
ACA1_037940Uncharacterized protein. (287 aa)
ACA1_3642503' exoribonuclease family, domain 1 domain containing protein. (524 aa)
ACA1_037920Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (437 aa)
ACA1_290100Krr1 family protein. (370 aa)
ACA1_258700Exosc8 protein. (278 aa)
ACA1_261070Three prime histone mRNA exonuclease 1, putative. (256 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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