STRINGSTRING
ACA1_085040 ACA1_085040 ACA1_108840 ACA1_108840 ACA1_180620 ACA1_180620 ACA1_181230 ACA1_181230 ACA1_180610 ACA1_180610 ACA1_109080 ACA1_109080 ACA1_180800 ACA1_180800 ACA1_048080 ACA1_048080 ACA1_299820 ACA1_299820 ACA1_323170 ACA1_323170 ACA1_136630 ACA1_136630 ACA1_256380 ACA1_256380 ACA1_258250 ACA1_258250 ACA1_261640 ACA1_261640 ACA1_261220 ACA1_261220 ACA1_273540 ACA1_273540 ACA1_258240 ACA1_258240 ACA1_258550 ACA1_258550 ACA1_261650 ACA1_261650 ACA1_117560 ACA1_117560 ACA1_362640 ACA1_362640 ACA1_140560 ACA1_140560 ACA1_140610 ACA1_140610 ACA1_399770 ACA1_399770 ACA1_318520 ACA1_318520 ACA1_256450 ACA1_256450 ACA1_101440 ACA1_101440 ACA1_374660 ACA1_374660 ACA1_324730 ACA1_324730 ACA1_273780 ACA1_273780 ACA1_092810 ACA1_092810 ACA1_399960 ACA1_399960 ACA1_095100 ACA1_095100 ACA1_093730 ACA1_093730 ACA1_025690 ACA1_025690 ACA1_091380 ACA1_091380 ACA1_092940 ACA1_092940 LSM4 LSM4 ACA1_092800 ACA1_092800 ACA1_332180 ACA1_332180 ACA1_096220 ACA1_096220 ACA1_037920 ACA1_037920 ACA1_332070 ACA1_332070 ACA1_097570 ACA1_097570 ACA1_365330 ACA1_365330 ACA1_365100 ACA1_365100 ACA1_077130 ACA1_077130 ACA1_364720 ACA1_364720 ACA1_365420 ACA1_365420 ACA1_131820 ACA1_131820 ACA1_037940 ACA1_037940 ACA1_077830 ACA1_077830 ACA1_078030 ACA1_078030 ACA1_077800 ACA1_077800 ACA1_325260 ACA1_325260 ACA1_367340 ACA1_367340 ACA1_131220 ACA1_131220 ACA1_276860 ACA1_276860 ACA1_220130 ACA1_220130 ACA1_163410 ACA1_163410 ACA1_220510 ACA1_220510 ACA1_216450 ACA1_216450 ACA1_125550 ACA1_125550 ACA1_220320 ACA1_220320 ACA1_188870 ACA1_188870 ACA1_325110 ACA1_325110 ACA1_379420 ACA1_379420 ACA1_223050 ACA1_223050 ACA1_211920 ACA1_211920 ACA1_179210 ACA1_179210 ACA1_223680 ACA1_223680 ACA1_204570 ACA1_204570 EIF6 EIF6 ACA1_178460 ACA1_178460 ACA1_276360 ACA1_276360 ACA1_204120 ACA1_204120 ACA1_087360 ACA1_087360 ACA1_177720 ACA1_177720 ACA1_178320 ACA1_178320 ACA1_383730 ACA1_383730 ACA1_088630 ACA1_088630 FEN1 FEN1 ACA1_061540 ACA1_061540 ACA1_061690 ACA1_061690 ACA1_042000 ACA1_042000 ACA1_063780 ACA1_063780 ACA1_062690 ACA1_062690 ACA1_248230 ACA1_248230 ACA1_088870 ACA1_088870 ACA1_058140 ACA1_058140 ACA1_090040 ACA1_090040 ACA1_065980 ACA1_065980 ACA1_066030 ACA1_066030 ACA1_321600 ACA1_321600 ACA1_368030 ACA1_368030 ACA1_066090 ACA1_066090 FEN1-2 FEN1-2 ACA1_207200 ACA1_207200 ACA1_392950 ACA1_392950 ACA1_166220 ACA1_166220 ACA1_369810 ACA1_369810 ACA1_370170 ACA1_370170 ACA1_249330 ACA1_249330 ACA1_037110 ACA1_037110 ACA1_232030 ACA1_232030 ACA1_262320 ACA1_262320 ACA1_236150 ACA1_236150 ACA1_137420 ACA1_137420 ACA1_232140 ACA1_232140 ACA1_266080 ACA1_266080 ACA1_233060 ACA1_233060 ACA1_266940 ACA1_266940 ACA1_298790 ACA1_298790 ACA1_000210 ACA1_000210 ACA1_323320 ACA1_323320 ACA1_199040 ACA1_199040 ACA1_199340 ACA1_199340 ACA1_201630 ACA1_201630 ACA1_009160 ACA1_009160 ACA1_237290 ACA1_237290 ACA1_113760 ACA1_113760 ACA1_266780 ACA1_266780 ACA1_098390 ACA1_098390 ACA1_200050 ACA1_200050 ACA1_052390 ACA1_052390 ACA1_117330 ACA1_117330 ACA1_195020 ACA1_195020 ACA1_052360 ACA1_052360 ACA1_115430 ACA1_115430 ACA1_115840 ACA1_115840 ACA1_053610 ACA1_053610 ACA1_053660 ACA1_053660 ACA1_114300 ACA1_114300 ACA1_114660 ACA1_114660 ACA1_278930 ACA1_278930 ACA1_116890 ACA1_116890 ACA1_098430 ACA1_098430 ACA1_194930 ACA1_194930 ACA1_227010 ACA1_227010 ACA1_182340 ACA1_182340 ACA1_182810 ACA1_182810 ACA1_230440 ACA1_230440 ACA1_183040 ACA1_183040 ACA1_343180 ACA1_343180 ACA1_286600 ACA1_286600 ACA1_182820 ACA1_182820 ACA1_046010 ACA1_046010 ACA1_183740 ACA1_183740 ACA1_252030 ACA1_252030 ACA1_327900 ACA1_327900 LSM3 LSM3 ACA1_228790 ACA1_228790 ACA1_251460 ACA1_251460 ACA1_034590 ACA1_034590 ACA1_149220 ACA1_149220 ACA1_149420 ACA1_149420 ACA1_157300 ACA1_157300 ACA1_141790 ACA1_141790 ACA1_158170 ACA1_158170 ACA1_360040 ACA1_360040 ACA1_149970 ACA1_149970 ACA1_036000 ACA1_036000 ACA1_068030 ACA1_068030 ACA1_398660 ACA1_398660 ACA1_142090 ACA1_142090 ACA1_360220 ACA1_360220 ACA1_360300 ACA1_360300 ACA1_307900 ACA1_307900 ACA1_251530 ACA1_251530 ACA1_361310 ACA1_361310 ACA1_072510 ACA1_072510 ACA1_361260 ACA1_361260 ACA1_072540 ACA1_072540 ACA1_073360 ACA1_073360 ACA1_144400 ACA1_144400 ACA1_300720 ACA1_300720 ACA1_025880 ACA1_025880 ACA1_375960 ACA1_375960 ACA1_169220 ACA1_169220 ACA1_356100 ACA1_356100 ACA1_075290 ACA1_075290 ACA1_013610 ACA1_013610 ACA1_143800 ACA1_143800 ACA1_072550 ACA1_072550 ACA1_073070 ACA1_073070 ACA1_272710 ACA1_272710 ACA1_170100 ACA1_170100 ACA1_169330 ACA1_169330 ACA1_174600 ACA1_174600 ACA1_109800 ACA1_109800 ACA1_110320 ACA1_110320 ACA1_376230 ACA1_376230 ACA1_287750 ACA1_287750 ACA1_173180 ACA1_173180 ACA1_174150 ACA1_174150 ACA1_174430 ACA1_174430 ACA1_338640 ACA1_338640 ACA1_175420 ACA1_175420 ACA1_291020 ACA1_291020 ACA1_169890 ACA1_169890 ACA1_287860 ACA1_287860 ACA1_356120 ACA1_356120 ACA1_289990 ACA1_289990 ACA1_174850 ACA1_174850 ACA1_291650 ACA1_291650 ACA1_291690 ACA1_291690 ACA1_171240 ACA1_171240 ACA1_171650 ACA1_171650 ACA1_294870 ACA1_294870 ACA1_295370 ACA1_295370 ACA1_173240 ACA1_173240 ACA1_110300 ACA1_110300 ACA1_296930 ACA1_296930 ACA1_174320 ACA1_174320 ACA1_175720 ACA1_175720 ACA1_018770 ACA1_018770 ACA1_030750 ACA1_030750 LSM8 LSM8 ACA1_110750 ACA1_110750 ACA1_288930 ACA1_288930 ACA1_290100 ACA1_290100 ACA1_290670 ACA1_290670
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_085040DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (782 aa)
ACA1_108840Adenosine deaminase, tRNAspecific 1, putative. (549 aa)
ACA1_180620CHHC U11-48K-type domain-containing protein. (223 aa)
ACA1_181230Poly [ADP-ribose] polymerase. (631 aa)
ACA1_180610tRNA guanosine2'-O-methyltransferase, putative. (249 aa)
ACA1_109080Nucleolar RNAassociated protein alpha isoform, putative. (457 aa)
ACA1_180800Nucleolar protein Nop56, putative. (517 aa)
ACA1_048080RNA binding protein, putative. (838 aa)
ACA1_299820SWIB/MDM2 domain containing protein. (424 aa)
ACA1_323170Utp14 protein. (907 aa)
ACA1_136630Bystin, putative. (345 aa)
ACA1_256380UBA/TS-N domain containing protein. (586 aa)
ACA1_258250KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (406 aa)
ACA1_261640Methyltransferase domain containing protein. (818 aa)
ACA1_261220SWIB/MDM2 domain containing protein. (424 aa)
ACA1_273540G domain-containing protein. (330 aa)
ACA1_258240KH domain containing protein. (100 aa)
ACA1_258550NOL1/NOP2/sun domain containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (542 aa)
ACA1_261650Helicase conserved Cterminal domain containing protein. (249 aa)
ACA1_117560NAD(+) ADP-ribosyltransferase. (330 aa)
ACA1_362640H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (204 aa)
ACA1_140560DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (107 aa)
ACA1_140610Poly [ADP-ribose] polymerase. (1501 aa)
ACA1_399770Poly(ADP-ribose) polymerase catalytic domain containing protein. (701 aa)
ACA1_318520RNA polymerase Rpb7 domain containing protein. (309 aa)
ACA1_256450Poly [ADP-ribose] polymerase. (774 aa)
ACA1_101440Uncharacterized protein. (248 aa)
ACA1_374660Poly [ADP-ribose] polymerase. (1893 aa)
ACA1_324730XPG Iregion domain containing protein. (551 aa)
ACA1_273780CP-type G domain-containing protein. (667 aa)
ACA1_092810SRP40, C-terminal domain containing protein. (339 aa)
ACA1_399960WD repeatcontaining protein JIP5, putative. (357 aa)
ACA1_095100UTP23, small subunit (SSU) processome component family protein. (325 aa)
ACA1_093730RNA polymerase subunit. (102 aa)
ACA1_025690Fibrillarin, putative. (307 aa)
ACA1_091380S1 RNA binding domain containing protein. (1936 aa)
ACA1_092940Uncharacterized protein. (64 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (131 aa)
ACA1_092800TRAUB domain containing protein. (620 aa)
ACA1_332180Nucleolar gtp-binding protein 1 family protein. (100 aa)
ACA1_096220Polynucleotide adenylyltransferase. (777 aa)
ACA1_037920Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (437 aa)
ACA1_332070Nucleolar gtpbinding protein 1, putative. (375 aa)
ACA1_097570Uncharacterized protein. (814 aa)
ACA1_365330DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (140 aa)
ACA1_365100U3 small nucleolar RNA-associated protein 6 protein. (628 aa)
ACA1_077130Uncharacterized protein. (787 aa)
ACA1_364720Sas10/Utp3/C1D family protein. (575 aa)
ACA1_365420HEAT repeat domain containing protein. (1071 aa)
ACA1_131820Zinc knuckle domain containing protein. (459 aa)
ACA1_037940Uncharacterized protein. (287 aa)
ACA1_077830Poly [ADP-ribose] polymerase. (3016 aa)
ACA1_078030rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (294 aa)
ACA1_077800Poly [ADP-ribose] polymerase. (135 aa)
ACA1_325260Peptidylprolyl isomerase. (1517 aa)
ACA1_367340U3 small nucleolar rnaassociated protein 7, putative. (585 aa)
ACA1_131220Poly [ADP-ribose] polymerase. (2562 aa)
ACA1_276860Ribonuclease, putative. (171 aa)
ACA1_220130Uncharacterized protein. (161 aa)
ACA1_163410Cupin superfamily subfamily protein. (1219 aa)
ACA1_220510U3 small nucleolar RNA-associated protein 15 family protein. (507 aa)
ACA1_216450Protein MAK16 homolog; Belongs to the MAK16 family. (285 aa)
ACA1_125550DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1139 aa)
ACA1_220320U3 small nucleolar RNA-associated protein 15, putative. (121 aa)
ACA1_188870Bystin, putative. (289 aa)
ACA1_3251103'5' exonuclease domain containing protein. (317 aa)
ACA1_379420Uncharacterized protein. (148 aa)
ACA1_223050Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
ACA1_211920DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (145 aa)
ACA1_179210Midasin family protein. (1483 aa)
ACA1_223680Uncharacterized protein. (852 aa)
ACA1_204570Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (316 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (244 aa)
ACA1_178460PAP/25A associated domain containing protein. (471 aa)
ACA1_276360Endonuclease V protein. (173 aa)
ACA1_204120DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1699 aa)
ACA1_087360MIF4G domain containing protein. (896 aa)
ACA1_177720Poly(ADPribose) polymerase and DNA-Ligase Zn-finger region domain containing protein. (296 aa)
ACA1_17832040S ribosomal protein S9. (184 aa)
ACA1_383730Uncharacterized protein. (235 aa)
ACA1_088630Surfeit locus protein 6 protein. (522 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (343 aa)
ACA1_061540WD domain, G-beta repeat-containing protein. (1035 aa)
ACA1_0616903' exoribonuclease family, domain 1 domain containing protein. (236 aa)
ACA1_042000SnRNP core protein SMX5d, putative. (113 aa)
ACA1_063780Nucleotidyltransferase domain containing protein. (911 aa)
ACA1_062690DEAD/DEAH box helicase domain containing protein. (926 aa)
ACA1_248230Ribonuclease P/MRP 30 subunit. (168 aa)
ACA1_088870Checkpoint protein; Belongs to the HUS1 family. (274 aa)
ACA1_058140Sarp-3, putative. (346 aa)
ACA1_090040RNA polymerase Rpb3/Rpb11 dimerization domain containing protein. (129 aa)
ACA1_065980Periodic tryptophan protein 2, putative. (940 aa)
ACA1_066030Uncharacterized protein. (926 aa)
ACA1_321600Poly [ADP-ribose] polymerase. (1777 aa)
ACA1_368030Brix domain containing protein. (353 aa)
ACA1_066090Uncharacterized protein. (186 aa)
FEN1-2Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (434 aa)
ACA1_207200Poly(ADPribose) polymerase, regulatory subfamily protein. (250 aa)
ACA1_392950Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (511 aa)
ACA1_166220rRNA-processing protein EBP2, putative. (125 aa)
ACA1_369810RNA helicase. (697 aa)
ACA1_370170Peptidylprolyl isomerase. (281 aa)
ACA1_249330CutC domain-containing protein. (248 aa)
ACA1_037110Bms1-type G domain-containing protein. (863 aa)
ACA1_232030Block of proliferation 1, putative. (210 aa)
ACA1_262320BRCA1 C Terminus (BRCT) domain containing protein. (287 aa)
ACA1_236150DNA-directed DNA polymerase. (1418 aa)
ACA1_137420LYAR-type C2HC zinc finger protein. (243 aa)
ACA1_232140Methyltransf_25 domain-containing protein. (97 aa)
ACA1_266080DEAD/DEAH box helicase/helicase conserved Cterminal domain containing protein; Belongs to the DEAD box helicase family. (369 aa)
ACA1_233060Notchless-related, putative. (369 aa)
ACA1_266940Tetratricopeptide repeat domain containing protein. (195 aa)
ACA1_2987903'5' exonuclease domain containing protein. (929 aa)
ACA1_000210H/ACA ribonucleoprotein complex subunit 3, putative. (64 aa)
ACA1_323320Gpatch domain containing protein. (377 aa)
ACA1_199040Pumiliofamily RNA binding repeat domain containing protein. (848 aa)
ACA1_199340BRCA1 C Terminus (BRCT) domain containing protein. (473 aa)
ACA1_201630Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (119 aa)
ACA1_009160Uncharacterized protein. (216 aa)
ACA1_237290Utp21 domain-containing protein. (214 aa)
ACA1_113760Signal recognition particle 19 kDa protein. (133 aa)
ACA1_266780Ribosomal RNA large subunit methyltransferase J, putative. (777 aa)
ACA1_098390Methyltransferase, putative. (289 aa)
ACA1_200050Poly [ADP-ribose] polymerase. (1098 aa)
ACA1_052390Nucleolar protein, putative. (601 aa)
ACA1_117330Hydroxylamine reductase. (646 aa)
ACA1_195020CBF/Mak21 family protein. (768 aa)
ACA1_052360Uncharacterized protein. (255 aa)
ACA1_115430DEAD/DEAH box helicase domain containing protein; Belongs to the DEAD box helicase family. (762 aa)
ACA1_115840Coiledcoil domain containing protein. (148 aa)
ACA1_053610RNA 3'terminal phosphate cyclase. (355 aa)
ACA1_053660TNF receptor-associated protein 1, putative. (733 aa)
ACA1_114300Poly(ADPribose) polymerase catalytic domain containing protein. (405 aa)
ACA1_114660DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1035 aa)
ACA1_278930RNA recognition motif domain containing protein. (711 aa)
ACA1_116890DNA-directed RNA polymerase II family protein. (151 aa)
ACA1_098430Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (739 aa)
ACA1_194930Matrix attachment region binding protein. (525 aa)
ACA1_227010U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (222 aa)
ACA1_182340NUC153 domain-containing protein. (713 aa)
ACA1_182810RNA helicase. (535 aa)
ACA1_230440P21activated protein kinase-interacting protein 1, putative. (542 aa)
ACA1_183040U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (656 aa)
ACA1_343180RNA polymerase Rpb3/Rpb11 dimerization domain containing protein. (350 aa)
ACA1_286600Midasin family protein. (1979 aa)
ACA1_182820Uncharacterized protein. (229 aa)
ACA1_046010Uncharacterized protein. (844 aa)
ACA1_183740Uncharacterized protein. (454 aa)
ACA1_252030Nucleolar complex associated protein, putative. (855 aa)
ACA1_327900Poly(ADPribose) polymerase catalytic domain containing protein. (363 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
ACA1_228790IgA-specific serine endopeptidase. (604 aa)
ACA1_251460U3 small nucleolar ribonucleoprotein component, putative. (277 aa)
ACA1_034590Helicase conserved Cterminal domain containing protein. (1322 aa)
ACA1_149220Sas10 Cterminal domain containing protein. (137 aa)
ACA1_149420Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)
ACA1_157300Eukaryotic dna topoisomerase, putative. (445 aa)
ACA1_141790Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (460 aa)
ACA1_158170Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (541 aa)
ACA1_360040Ribosomal protein S8e, putative. (259 aa)
ACA1_149970Poly [ADP-ribose] polymerase. (609 aa)
ACA1_036000DEAD/DEAH box helicase domain containing protein; Belongs to the DEAD box helicase family. (689 aa)
ACA1_068030Gpatch domain containing protein. (351 aa)
ACA1_398660Nucleolar gtpbinding protein 1, putative. (525 aa)
ACA1_142090rRNA metabolism protein, SBDS family. (268 aa)
ACA1_360220Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (140 aa)
ACA1_3603003' exoribonuclease family, domain 1 domain containing protein. (274 aa)
ACA1_307900Uncharacterized protein. (664 aa)
ACA1_251530PINc domain-containing protein. (207 aa)
ACA1_361310Methyltransferase domain containing protein. (264 aa)
ACA1_072510Uncharacterized protein. (132 aa)
ACA1_361260Brix domain containing 2, putative. (294 aa)
ACA1_072540Smlike protein LSm6, putative. (84 aa)
ACA1_073360RNA recognition motif domain containing protein. (425 aa)
ACA1_144400WD repeat protein WDR3, putative. (1010 aa)
ACA1_300720WD repeat domain 43 isoform 5, putative. (252 aa)
ACA1_025880Uncharacterized protein. (456 aa)
ACA1_375960ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (792 aa)
ACA1_169220SAM domain (Sterile alpha motif) domain containing protein. (591 aa)
ACA1_356100Poly [ADP-ribose] polymerase. (1326 aa)
ACA1_075290rRNA pseudouridine synthase, putative. (523 aa)
ACA1_013610Nucleotidyltransferase domain containing protein. (1552 aa)
ACA1_143800Ribosome biogenesis protein nop16 protein. (191 aa)
ACA1_072550Estrogen receptor binding protein. (247 aa)
ACA1_073070Exosome component 3, putative. (233 aa)
ACA1_272710Poly [ADP-ribose] polymerase. (731 aa)
ACA1_170100DEAD (AspGlu-Ala-Asp) box polypeptide 47 isoform 3, putative. (261 aa)
ACA1_169330RNA polymerase Rpb5, Cterminal domain containing protein. (204 aa)
ACA1_174600Vault protein inter-alpha-trypsin protein. (735 aa)
ACA1_109800WD domain, Gbeta repeat containing protein. (413 aa)
ACA1_110320DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (643 aa)
ACA1_376230NUC153 domain-containing protein. (641 aa)
ACA1_287750Sas10/Utp3/C1D family protein. (172 aa)
ACA1_173180EMG1 nucleolar protein, putative. (227 aa)
ACA1_174150RRP7 domain-containing protein. (383 aa)
ACA1_174430Ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS15 family. (151 aa)
ACA1_338640Poly [ADP-ribose] polymerase. (216 aa)
ACA1_175420Uncharacterized protein. (450 aa)
ACA1_291020Exosome complex exonuclease rrp41, putative. (205 aa)
ACA1_169890DEAD/DEAH box helicase domain containing protein; Belongs to the DEAD box helicase family. (335 aa)
ACA1_287860BP28CT domain-containing protein. (2409 aa)
ACA1_356120Uncharacterized protein. (622 aa)
ACA1_289990Uncharacterized protein. (329 aa)
ACA1_174850WD repeatcontaining protein 74, putative. (343 aa)
ACA1_291650Ribosomal protein L24e, putative. (162 aa)
ACA1_291690Nop14 family protein. (938 aa)
ACA1_171240Ribosomal protein L7Ae protein. (381 aa)
ACA1_171650Exosome component 7, putative. (263 aa)
ACA1_294870WD_REPEATS_REGION domain-containing protein. (456 aa)
ACA1_295370Ribosome biogenesis protein. (1180 aa)
ACA1_173240Poly [ADP-ribose] polymerase. (1093 aa)
ACA1_110300RNA polymerase. (546 aa)
ACA1_296930Cirhin isoform 3, putative. (662 aa)
ACA1_174320NOL1/NOP2/sun family putative RNA methylase subfamily protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (689 aa)
ACA1_175720RNA recognition motif domain containing protein. (468 aa)
ACA1_018770Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (590 aa)
ACA1_030750Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (150 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
ACA1_110750RNA polymerase I large subunit. (433 aa)
ACA1_288930Uncharacterized protein. (2103 aa)
ACA1_290100Krr1 family protein. (370 aa)
ACA1_290670Sm domain-containing protein. (96 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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