STRINGSTRING
ACA1_388300 ACA1_388300 ACA1_109080 ACA1_109080 ACA1_180800 ACA1_180800 ACA1_048080 ACA1_048080 ACA1_323170 ACA1_323170 ACA1_136630 ACA1_136630 ACA1_027270 ACA1_027270 ACA1_258700 ACA1_258700 ACA1_135620 ACA1_135620 ACA1_258250 ACA1_258250 ACA1_261640 ACA1_261640 ACA1_261070 ACA1_261070 ACA1_258240 ACA1_258240 ACA1_258550 ACA1_258550 ACA1_261650 ACA1_261650 ACA1_362640 ACA1_362640 ACA1_400580 ACA1_400580 ACA1_373720 ACA1_373720 ACA1_095100 ACA1_095100 ACA1_092140 ACA1_092140 ACA1_025690 ACA1_025690 ACA1_091380 ACA1_091380 ACA1_097580 ACA1_097580 ACA1_100050 ACA1_100050 ACA1_349780 ACA1_349780 ACA1_100040 ACA1_100040 ACA1_244820 ACA1_244820 ACA1_037920 ACA1_037920 ACA1_097570 ACA1_097570 ACA1_365100 ACA1_365100 ACA1_364250 ACA1_364250 ACA1_364720 ACA1_364720 ACA1_006580 ACA1_006580 ACA1_131820 ACA1_131820 ACA1_037940 ACA1_037940 ACA1_131810 ACA1_131810 ACA1_271300 ACA1_271300 ACA1_078030 ACA1_078030 ACA1_367340 ACA1_367340 ACA1_276860 ACA1_276860 ACA1_220510 ACA1_220510 ACA1_220680 ACA1_220680 ACA1_216050 ACA1_216050 ACA1_216450 ACA1_216450 ACA1_066720 ACA1_066720 ACA1_220170 ACA1_220170 ACA1_220320 ACA1_220320 ACA1_188870 ACA1_188870 ACA1_379210 ACA1_379210 ACA1_325110 ACA1_325110 ACA1_223050 ACA1_223050 ACA1_078540 ACA1_078540 ACA1_025550 ACA1_025550 ACA1_377420 ACA1_377420 ACA1_204570 ACA1_204570 EIF6 EIF6 ACA1_352480 ACA1_352480 ACA1_204440 ACA1_204440 ACA1_178320 ACA1_178320 ACA1_178720 ACA1_178720 ACA1_383730 ACA1_383730 ACA1_062210 ACA1_062210 ACA1_061250 ACA1_061250 ACA1_062690 ACA1_062690 ACA1_248230 ACA1_248230 ACA1_058140 ACA1_058140 ACA1_065980 ACA1_065980 ACA1_368030 ACA1_368030 ACA1_368870 ACA1_368870 ACA1_138320 ACA1_138320 ACA1_166220 ACA1_166220 ACA1_163150 ACA1_163150 ACA1_369810 ACA1_369810 ACA1_037110 ACA1_037110 ACA1_232030 ACA1_232030 ACA1_266810 ACA1_266810 ACA1_137420 ACA1_137420 ACA1_232140 ACA1_232140 ACA1_266990 ACA1_266990 ACA1_267040 ACA1_267040 ACA1_268880 ACA1_268880 ACA1_269280 ACA1_269280 ACA1_298790 ACA1_298790 ACA1_000210 ACA1_000210 ACA1_198580 ACA1_198580 ACA1_199040 ACA1_199040 ACA1_201140 ACA1_201140 ACA1_201630 ACA1_201630 ACA1_237290 ACA1_237290 ACA1_115720 ACA1_115720 ACA1_266780 ACA1_266780 ACA1_098390 ACA1_098390 ACA1_277420 ACA1_277420 ACA1_115430 ACA1_115430 ACA1_053610 ACA1_053610 ACA1_053940 ACA1_053940 ACA1_277460 ACA1_277460 ACA1_277980 ACA1_277980 ACA1_278930 ACA1_278930 ACA1_098430 ACA1_098430 ACA1_227010 ACA1_227010 ACA1_182340 ACA1_182340 ACA1_182810 ACA1_182810 ACA1_183040 ACA1_183040 ACA1_182820 ACA1_182820 ACA1_126700 ACA1_126700 ACA1_157270 ACA1_157270 ACA1_228790 ACA1_228790 ACA1_142620 ACA1_142620 ACA1_251460 ACA1_251460 ACA1_252450 ACA1_252450 ACA1_034590 ACA1_034590 ACA1_254040 ACA1_254040 ACA1_253360 ACA1_253360 ACA1_228720 ACA1_228720 ACA1_149220 ACA1_149220 ACA1_149420 ACA1_149420 ACA1_141790 ACA1_141790 ACA1_158170 ACA1_158170 ACA1_360040 ACA1_360040 ACA1_035330 ACA1_035330 ACA1_036000 ACA1_036000 ACA1_360220 ACA1_360220 ACA1_069840 ACA1_069840 ACA1_251530 ACA1_251530 ACA1_142640 ACA1_142640 ACA1_195560 ACA1_195560 ACA1_361260 ACA1_361260 ACA1_072540 ACA1_072540 ACA1_036040 ACA1_036040 ACA1_144400 ACA1_144400 ACA1_073490 ACA1_073490 ACA1_300720 ACA1_300720 ACA1_375960 ACA1_375960 ACA1_075290 ACA1_075290 ACA1_068750 ACA1_068750 ACA1_143800 ACA1_143800 ACA1_069200 ACA1_069200 ACA1_073070 ACA1_073070 ACA1_170100 ACA1_170100 ACA1_109800 ACA1_109800 ACA1_110320 ACA1_110320 ACA1_376230 ACA1_376230 ACA1_287750 ACA1_287750 ACA1_173180 ACA1_173180 ACA1_174150 ACA1_174150 ACA1_169890 ACA1_169890 ACA1_287860 ACA1_287860 ACA1_288920 ACA1_288920 ACA1_289990 ACA1_289990 ACA1_291000 ACA1_291000 ACA1_291690 ACA1_291690 ACA1_171240 ACA1_171240 ACA1_171650 ACA1_171650 ACA1_294870 ACA1_294870 ACA1_295370 ACA1_295370 ACA1_296930 ACA1_296930 ACA1_174320 ACA1_174320 ACA1_287840 ACA1_287840 ACA1_175720 ACA1_175720 ACA1_291360 ACA1_291360 ACA1_288930 ACA1_288930 ACA1_290100 ACA1_290100
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_388300Zinc finger, HIT domain containing 2, putative. (463 aa)
ACA1_109080Nucleolar RNAassociated protein alpha isoform, putative. (457 aa)
ACA1_180800Nucleolar protein Nop56, putative. (517 aa)
ACA1_048080RNA binding protein, putative. (838 aa)
ACA1_323170Utp14 protein. (907 aa)
ACA1_136630Bystin, putative. (345 aa)
ACA1_027270HAD_SAK_1 domain-containing protein. (241 aa)
ACA1_258700Exosc8 protein. (278 aa)
ACA1_13562023S rRNA methyltransferase, putative. (420 aa)
ACA1_258250KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (406 aa)
ACA1_261640Methyltransferase domain containing protein. (818 aa)
ACA1_261070Three prime histone mRNA exonuclease 1, putative. (256 aa)
ACA1_258240KH domain containing protein. (100 aa)
ACA1_258550NOL1/NOP2/sun domain containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (542 aa)
ACA1_261650Helicase conserved Cterminal domain containing protein. (249 aa)
ACA1_362640H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (204 aa)
ACA1_400580Probable ribosome biogenesis protein ACA1_400580; Probable pre-rRNA processing protein involved in ribosome biogenesis. (293 aa)
ACA1_373720Exonuclease. (277 aa)
ACA1_095100UTP23, small subunit (SSU) processome component family protein. (325 aa)
ACA1_092140RNA pseudouridine synthase. (272 aa)
ACA1_025690Fibrillarin, putative. (307 aa)
ACA1_091380S1 RNA binding domain containing protein. (1936 aa)
ACA1_097580Uncharacterized protein. (375 aa)
ACA1_100050DRAP deaminase. (180 aa)
ACA1_349780HIT-type domain-containing protein. (224 aa)
ACA1_100040S4 RNA-binding domain-containing protein. (213 aa)
ACA1_244820DEAD/DEAH box helicase domain containing protein. (789 aa)
ACA1_037920Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (437 aa)
ACA1_097570Uncharacterized protein. (814 aa)
ACA1_365100U3 small nucleolar RNA-associated protein 6 protein. (628 aa)
ACA1_3642503' exoribonuclease family, domain 1 domain containing protein. (524 aa)
ACA1_364720Sas10/Utp3/C1D family protein. (575 aa)
ACA1_006580rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (270 aa)
ACA1_131820Zinc knuckle domain containing protein. (459 aa)
ACA1_037940Uncharacterized protein. (287 aa)
ACA1_13181040S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (79 aa)
ACA1_271300Rpl7A, putative. (282 aa)
ACA1_078030rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (294 aa)
ACA1_367340U3 small nucleolar rnaassociated protein 7, putative. (585 aa)
ACA1_276860Ribonuclease, putative. (171 aa)
ACA1_220510U3 small nucleolar RNA-associated protein 15 family protein. (507 aa)
ACA1_220680DUF2431 domain-containing protein. (543 aa)
ACA1_216050RNase3 domain containing protein. (928 aa)
ACA1_216450Protein MAK16 homolog; Belongs to the MAK16 family. (285 aa)
ACA1_066720Exonuclease, putative. (927 aa)
ACA1_220170RSL1D1 protein. (817 aa)
ACA1_220320U3 small nucleolar RNA-associated protein 15, putative. (121 aa)
ACA1_188870Bystin, putative. (289 aa)
ACA1_379210RNA pseudouridine synthase superfamily protein. (293 aa)
ACA1_3251103'5' exonuclease domain containing protein. (317 aa)
ACA1_223050Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
ACA1_078540Sadenosyl-methyltransferase MraW. (896 aa)
ACA1_025550L1P family protein. (312 aa)
ACA1_377420L1P family protein. (299 aa)
ACA1_204570Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (316 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (244 aa)
ACA1_352480L1P family protein. (309 aa)
ACA1_204440Uncharacterized protein. (986 aa)
ACA1_17832040S ribosomal protein S9. (184 aa)
ACA1_178720Pseudouridine synthase Rsu, putative. (394 aa)
ACA1_383730Uncharacterized protein. (235 aa)
ACA1_062210RNA pseudouridine synthase, putative. (509 aa)
ACA1_061250Peptidyl-prolyl cis-trans isomerase. (113 aa)
ACA1_062690DEAD/DEAH box helicase domain containing protein. (926 aa)
ACA1_248230Ribonuclease P/MRP 30 subunit. (168 aa)
ACA1_058140Sarp-3, putative. (346 aa)
ACA1_065980Periodic tryptophan protein 2, putative. (940 aa)
ACA1_368030Brix domain containing protein. (353 aa)
ACA1_368870ATPdependent RNA helicase DBP2, putative; Belongs to the DEAD box helicase family. (536 aa)
ACA1_138320Brix domain containing protein. (505 aa)
ACA1_166220rRNA-processing protein EBP2, putative. (125 aa)
ACA1_163150HIT zinc finger protein. (469 aa)
ACA1_369810RNA helicase. (697 aa)
ACA1_037110Bms1-type G domain-containing protein. (863 aa)
ACA1_232030Block of proliferation 1, putative. (210 aa)
ACA1_266810Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (575 aa)
ACA1_137420LYAR-type C2HC zinc finger protein. (243 aa)
ACA1_232140Methyltransf_25 domain-containing protein. (97 aa)
ACA1_266990Las1 family protein. (572 aa)
ACA1_267040Nin one binding (NOB1) Zn-ribbon family protein. (641 aa)
ACA1_268880Ribosomal protein S9, putative; Belongs to the universal ribosomal protein uS9 family. (150 aa)
ACA1_269280RNA methyltransferase protein. (385 aa)
ACA1_2987903'5' exonuclease domain containing protein. (929 aa)
ACA1_000210H/ACA ribonucleoprotein complex subunit 3, putative. (64 aa)
ACA1_198580Transducin family protein. (480 aa)
ACA1_199040Pumiliofamily RNA binding repeat domain containing protein. (848 aa)
ACA1_201140Uncharacterized protein. (219 aa)
ACA1_201630Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (119 aa)
ACA1_237290Utp21 domain-containing protein. (214 aa)
ACA1_115720SAM-dependent methyltransferase. (342 aa)
ACA1_266780Ribosomal RNA large subunit methyltransferase J, putative. (777 aa)
ACA1_098390Methyltransferase, putative. (289 aa)
ACA1_277420Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity; Belongs to the adenylate kinase family. AK6 subfamily. (177 aa)
ACA1_115430DEAD/DEAH box helicase domain containing protein; Belongs to the DEAD box helicase family. (762 aa)
ACA1_053610RNA 3'terminal phosphate cyclase. (355 aa)
ACA1_053940Methyltransferase family protein 5, putative. (227 aa)
ACA1_277460CrcB family protein. (1343 aa)
ACA1_277980Mitochondrial rrna methyltransferase. (168 aa)
ACA1_278930RNA recognition motif domain containing protein. (711 aa)
ACA1_098430Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (739 aa)
ACA1_227010U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (222 aa)
ACA1_182340NUC153 domain-containing protein. (713 aa)
ACA1_182810RNA helicase. (535 aa)
ACA1_183040U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (656 aa)
ACA1_182820Uncharacterized protein. (229 aa)
ACA1_126700TRM112 family protein. (122 aa)
ACA1_157270DEAD box RNA helicase; Belongs to the DEAD box helicase family. (596 aa)
ACA1_228790IgA-specific serine endopeptidase. (604 aa)
ACA1_142620ATPdependent RNA helicase dbp2, putative; Belongs to the DEAD box helicase family. (706 aa)
ACA1_251460U3 small nucleolar ribonucleoprotein component, putative. (277 aa)
ACA1_252450L1P family protein. (264 aa)
ACA1_034590Helicase conserved Cterminal domain containing protein. (1322 aa)
ACA1_254040RIO1 family protein. (390 aa)
ACA1_253360Tetrapyrrole methylase domain containing protein. (225 aa)
ACA1_228720BRO1like domain containing protein. (375 aa)
ACA1_149220Sas10 Cterminal domain containing protein. (137 aa)
ACA1_149420Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)
ACA1_141790Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (460 aa)
ACA1_158170Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (541 aa)
ACA1_360040Ribosomal protein S8e, putative. (259 aa)
ACA1_035330Helicase domain containing protein. (788 aa)
ACA1_036000DEAD/DEAH box helicase domain containing protein; Belongs to the DEAD box helicase family. (689 aa)
ACA1_360220Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (140 aa)
ACA1_069840Pseudouridine synthase, RluD, putative. (256 aa)
ACA1_251530PINc domain-containing protein. (207 aa)
ACA1_142640Uncharacterized protein. (568 aa)
ACA1_195560RIO1 family/Rio2, Nterminal domain containing protein. (521 aa)
ACA1_361260Brix domain containing 2, putative. (294 aa)
ACA1_072540Smlike protein LSm6, putative. (84 aa)
ACA1_03604040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (189 aa)
ACA1_144400WD repeat protein WDR3, putative. (1010 aa)
ACA1_073490WD repeatcontaining protein. (434 aa)
ACA1_300720WD repeat domain 43 isoform 5, putative. (252 aa)
ACA1_375960ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (792 aa)
ACA1_075290rRNA pseudouridine synthase, putative. (523 aa)
ACA1_068750Ribosomal protein L35, putative. (124 aa)
ACA1_143800Ribosome biogenesis protein nop16 protein. (191 aa)
ACA1_069200Uncharacterized protein. (758 aa)
ACA1_073070Exosome component 3, putative. (233 aa)
ACA1_170100DEAD (AspGlu-Ala-Asp) box polypeptide 47 isoform 3, putative. (261 aa)
ACA1_109800WD domain, Gbeta repeat containing protein. (413 aa)
ACA1_110320DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. (643 aa)
ACA1_376230NUC153 domain-containing protein. (641 aa)
ACA1_287750Sas10/Utp3/C1D family protein. (172 aa)
ACA1_173180EMG1 nucleolar protein, putative. (227 aa)
ACA1_174150RRP7 domain-containing protein. (383 aa)
ACA1_169890DEAD/DEAH box helicase domain containing protein; Belongs to the DEAD box helicase family. (335 aa)
ACA1_287860BP28CT domain-containing protein. (2409 aa)
ACA1_28892040S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (250 aa)
ACA1_289990Uncharacterized protein. (329 aa)
ACA1_291000Ribonuclease III, putative. (805 aa)
ACA1_291690Nop14 family protein. (938 aa)
ACA1_171240Ribosomal protein L7Ae protein. (381 aa)
ACA1_171650Exosome component 7, putative. (263 aa)
ACA1_294870WD_REPEATS_REGION domain-containing protein. (456 aa)
ACA1_295370Ribosome biogenesis protein. (1180 aa)
ACA1_296930Cirhin isoform 3, putative. (662 aa)
ACA1_174320NOL1/NOP2/sun family putative RNA methylase subfamily protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (689 aa)
ACA1_287840RFX-type winged-helix domain-containing protein. (388 aa)
ACA1_175720RNA recognition motif domain containing protein. (468 aa)
ACA1_291360Ribosomal protein S11, putative. (77 aa)
ACA1_288930Uncharacterized protein. (2103 aa)
ACA1_290100Krr1 family protein. (370 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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