STRINGSTRING
ACA1_053640 ACA1_053640 ACA1_186870 ACA1_186870 ACA1_116890 ACA1_116890 ACA1_142400 ACA1_142400 ACA1_144380 ACA1_144380 ACA1_294840 ACA1_294840 ACA1_288640 ACA1_288640 ACA1_190240 ACA1_190240 ACA1_038160 ACA1_038160 ACA1_051820 ACA1_051820 ACA1_218610 ACA1_218610 ACA1_215980 ACA1_215980 ACA1_234280 ACA1_234280 ACA1_111900 ACA1_111900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_053640Transcription elongation factor SPT5. (1184 aa)
ACA1_186870Protein kinase domain containing protein. (639 aa)
ACA1_116890DNA-directed RNA polymerase II family protein. (151 aa)
ACA1_142400Plus3 domain containing protein. (627 aa)
ACA1_144380Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1378 aa)
ACA1_294840Transcription elongation factor SII, hS-II-T1 isoform 8, putative. (188 aa)
ACA1_288640Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (81 aa)
ACA1_190240Rtt106 domain-containing protein. (846 aa)
ACA1_038160Cyclindependent kinase. (605 aa)
ACA1_051820Ubiquitin family protein. (103 aa)
ACA1_218610Uncharacterized protein. (356 aa)
ACA1_215980Adhesion regulating molecule region protein, putative. (398 aa)
ACA1_234280Uncharacterized protein. (560 aa)
ACA1_111900Global transcription factor, putative. (1120 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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