STRINGSTRING
ACA1_090250 ACA1_090250 ACA1_260090 ACA1_260090 ACA1_240350 ACA1_240350 ACA1_038370 ACA1_038370 ACA1_327400 ACA1_327400 ACA1_391600 ACA1_391600 ACA1_130970 ACA1_130970 ACA1_210210 ACA1_210210 ACA1_192060 ACA1_192060 ACA1_378490 ACA1_378490 ACA1_379230 ACA1_379230 ACA1_178480 ACA1_178480 ACA1_331480 ACA1_331480 ACA1_063910 ACA1_063910 ACA1_291540 ACA1_291540 ACA1_287780 ACA1_287780 ACA1_291620 ACA1_291620 ACA1_073270 ACA1_073270 ACA1_150010 ACA1_150010 ACA1_249770 ACA1_249770 ACA1_282890 ACA1_282890 ACA1_184310 ACA1_184310 ACA1_199490 ACA1_199490 ACA1_040700 ACA1_040700 ACA1_248680 ACA1_248680
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_090250RNA export 1, putative. (335 aa)
ACA1_260090THO complex 5, putative. (527 aa)
ACA1_240350Nuclear pore complexassociated protein TPR, putative. (1990 aa)
ACA1_038370Uncharacterized protein. (374 aa)
ACA1_327400Uncharacterized protein. (549 aa)
ACA1_391600Uncharacterized protein. (1473 aa)
ACA1_130970THO2 protein. (1521 aa)
ACA1_210210THO1 protein (Nuclear matrix protein p84), putative. (451 aa)
ACA1_192060Initiation factor eif4 gamma, middle, putative. (700 aa)
ACA1_378490Uncharacterized protein. (420 aa)
ACA1_379230RNA recognition motif domain containing protein. (257 aa)
ACA1_178480Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (885 aa)
ACA1_331480Membraneassociated ring finger (C3HC4) 2, putative. (210 aa)
ACA1_063910Tho complex subunit 7 protein. (281 aa)
ACA1_291540Nuclear pore protein. (823 aa)
ACA1_287780IWS1 Cterminus domain containing protein. (661 aa)
ACA1_291620DNAdirected RNA polymerase II subunit rpb4, putative. (135 aa)
ACA1_073270THO complex 3 family protein. (255 aa)
ACA1_150010Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (681 aa)
ACA1_249770Uncharacterized protein. (466 aa)
ACA1_282890Arginine nmethyltransferase, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (352 aa)
ACA1_184310DEAD/DEAH box helicase domain containing protein. (335 aa)
ACA1_199490ATPdependent RNA helicase DBP5, putative. (471 aa)
ACA1_040700GLE1 family protein. (576 aa)
ACA1_248680SAC3/GANP family protein. (2155 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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