STRINGSTRING
ACA1_293870 ACA1_293870 ACA1_296860 ACA1_296860 ACA1_378890 ACA1_378890 ACA1_130580 ACA1_130580 ACA1_215480 ACA1_215480 ACA1_218700 ACA1_218700 ACA1_380780 ACA1_380780 ACA1_217700 ACA1_217700 ACA1_191540 ACA1_191540 ACA1_192060 ACA1_192060 ACA1_212840 ACA1_212840 ACA1_220630 ACA1_220630 ACA1_193240 ACA1_193240 ACA1_275790 ACA1_275790 ACA1_164080 ACA1_164080 ACA1_390780 ACA1_390780 ACA1_220640 ACA1_220640 ACA1_325110 ACA1_325110 ACA1_050870 ACA1_050870 ACA1_031670 ACA1_031670 ACA1_051840 ACA1_051840 ACA1_223050 ACA1_223050 ACA1_211920 ACA1_211920 ACA1_224690 ACA1_224690 ACA1_023820 ACA1_023820 ACA1_215730 ACA1_215730 ACA1_219060 ACA1_219060 ACA1_219460 ACA1_219460 ACA1_331480 ACA1_331480 ACA1_177250 ACA1_177250 ACA1_088590 ACA1_088590 ACA1_164930 ACA1_164930 ACA1_382380 ACA1_382380 ACA1_383430 ACA1_383430 ACA1_042040 ACA1_042040 ACA1_057390 ACA1_057390 ACA1_042680 ACA1_042680 ACA1_043130 ACA1_043130 ACA1_087300 ACA1_087300 ACA1_224920 ACA1_224920 ACA1_060610 ACA1_060610 ACA1_061690 ACA1_061690 ACA1_204060 ACA1_204060 ACA1_042000 ACA1_042000 ACA1_060020 ACA1_060020 ACA1_060220 ACA1_060220 ACA1_063380 ACA1_063380 ACA1_061520 ACA1_061520 ACA1_089240 ACA1_089240 ACA1_058340 ACA1_058340 ACA1_090090 ACA1_090090 ACA1_208220 ACA1_208220 ACA1_063910 ACA1_063910 ACA1_065750 ACA1_065750 ACA1_043120 ACA1_043120 ACA1_248620 ACA1_248620 ACA1_369110 ACA1_369110 ACA1_207490 ACA1_207490 ACA1_062670 ACA1_062670 ACA1_369920 ACA1_369920 ACA1_062870 ACA1_062870 ACA1_208350 ACA1_208350 ACA1_083900 ACA1_083900 ACA1_368870 ACA1_368870 ACA1_369140 ACA1_369140 ACA1_029390 ACA1_029390 ACA1_248370 ACA1_248370 ACA1_370100 ACA1_370100 ACA1_372070 ACA1_372070 ACA1_062130 ACA1_062130 ACA1_155610 ACA1_155610 ACA1_041000 ACA1_041000 ACA1_154290 ACA1_154290 ACA1_155210 ACA1_155210 ACA1_368240 ACA1_368240 ACA1_232660 ACA1_232660 ACA1_393280 ACA1_393280 ACA1_370110 ACA1_370110 ACA1_234620 ACA1_234620 ACA1_233080 ACA1_233080 ACA1_234280 ACA1_234280 ACA1_235050 ACA1_235050 ACA1_007510 ACA1_007510 ACA1_264400 ACA1_264400 ACA1_264860 ACA1_264860 ACA1_200160 ACA1_200160 ACA1_267310 ACA1_267310 ACA1_234310 ACA1_234310 ACA1_268930 ACA1_268930 ACA1_298790 ACA1_298790 ACA1_236510 ACA1_236510 ACA1_112070 ACA1_112070 ACA1_113440 ACA1_113440 ACA1_236140 ACA1_236140 ACA1_184610 ACA1_184610 ACA1_113910 ACA1_113910 ACA1_114770 ACA1_114770 ACA1_115800 ACA1_115800 ACA1_267030 ACA1_267030 ACA1_115860 ACA1_115860 ACA1_116510 ACA1_116510 ACA1_201660 ACA1_201660 ACA1_117330 ACA1_117330 ACA1_053270 ACA1_053270 ACA1_338770 ACA1_338770 ACA1_114780 ACA1_114780 ACA1_279510 ACA1_279510 ACA1_279760 ACA1_279760 ACA1_116470 ACA1_116470 ACA1_116890 ACA1_116890 ACA1_283440 ACA1_283440 ACA1_195180 ACA1_195180 ACA1_195230 ACA1_195230 ACA1_283320 ACA1_283320 ACA1_182910 ACA1_182910 ACA1_054320 ACA1_054320 ACA1_282170 ACA1_282170 ACA1_277500 ACA1_277500 ACA1_277700 ACA1_277700 ACA1_144810 ACA1_144810 ACA1_354330 ACA1_354330 ACA1_389060 ACA1_389060 ACA1_354370 ACA1_354370 ACA1_317280 ACA1_317280 ACA1_388780 ACA1_388780 ACA1_389380 ACA1_389380 ACA1_389680 ACA1_389680 ACA1_190760 ACA1_190760 ACA1_189590 ACA1_189590 ACA1_190750 ACA1_190750 ACA1_258700 ACA1_258700 ACA1_261450 ACA1_261450 ACA1_362690 ACA1_362690 ACA1_354490 ACA1_354490 ACA1_258290 ACA1_258290 ACA1_314230 ACA1_314230 ACA1_400170 ACA1_400170 ACA1_260950 ACA1_260950 ACA1_388770 ACA1_388770 ACA1_189300 ACA1_189300 ACA1_190630 ACA1_190630 ACA1_134990 ACA1_134990 ACA1_101400 ACA1_101400 ACA1_002780 ACA1_002780 ACA1_374710 ACA1_374710 ACA1_140170 ACA1_140170 ACA1_373630 ACA1_373630 ACA1_261460 ACA1_261460 ACA1_309610 ACA1_309610 ACA1_309660 ACA1_309660 ACA1_093050 ACA1_093050 ACA1_156200 ACA1_156200 ACA1_152090 ACA1_152090 ACA1_092990 ACA1_092990 ACA1_093300 ACA1_093300 ACA1_140270 ACA1_140270 ACA1_094940 ACA1_094940 ACA1_095240 ACA1_095240 ACA1_098220 ACA1_098220 ACA1_349660 ACA1_349660 LSM4 LSM4 ACA1_100500 ACA1_100500 ACA1_100650 ACA1_100650 ACA1_020090 ACA1_020090 ACA1_244090 ACA1_244090 ACA1_230320 ACA1_230320 ACA1_384000 ACA1_384000 ACA1_281200 ACA1_281200 ACA1_182870 ACA1_182870 ACA1_125980 ACA1_125980 ACA1_157270 ACA1_157270 ACA1_158500 ACA1_158500 LSM3 LSM3 ACA1_230430 ACA1_230430 ACA1_251330 ACA1_251330 ACA1_142620 ACA1_142620 ACA1_254420 ACA1_254420 ACA1_149270 ACA1_149270 ACA1_149420 ACA1_149420 ACA1_046150 ACA1_046150 ACA1_157280 ACA1_157280 ACA1_396210 ACA1_396210 ACA1_012330 ACA1_012330 ACA1_141880 ACA1_141880 ACA1_159130 ACA1_159130 ACA1_159840 ACA1_159840 ACA1_360000 ACA1_360000 ACA1_360050 ACA1_360050 ACA1_360300 ACA1_360300 ACA1_252870 ACA1_252870 ACA1_361290 ACA1_361290 LSM1 LSM1 ACA1_069240 ACA1_069240 ACA1_142690 ACA1_142690 ACA1_070160 ACA1_070160 ACA1_070640 ACA1_070640 ACA1_074460 ACA1_074460 ACA1_072190 ACA1_072190 ACA1_072540 ACA1_072540 ACA1_072170 ACA1_072170 ACA1_396970 ACA1_396970 ACA1_196320 ACA1_196320 ACA1_075260 ACA1_075260 ACA1_074420 ACA1_074420 ACA1_075290 ACA1_075290 ACA1_144380 ACA1_144380 ACA1_166100 ACA1_166100 ACA1_072200 ACA1_072200 ACA1_072300 ACA1_072300 ACA1_376220 ACA1_376220 ACA1_073070 ACA1_073070 ACA1_153600 ACA1_153600 ACA1_170960 ACA1_170960 ACA1_376250 ACA1_376250 ACA1_197080 ACA1_197080 ACA1_071980 ACA1_071980 ACA1_074600 ACA1_074600 ACA1_174450 ACA1_174450 ACA1_073350 ACA1_073350 ACA1_175490 ACA1_175490 ACA1_006240 ACA1_006240 ACA1_144390 ACA1_144390 ACA1_153070 ACA1_153070 ACA1_272550 ACA1_272550 ACA1_289060 ACA1_289060 ACA1_289720 ACA1_289720 ACA1_291020 ACA1_291020 ACA1_333280 ACA1_333280 ACA1_291620 ACA1_291620 ACA1_030740 ACA1_030740 ACA1_170950 ACA1_170950 ACA1_295440 ACA1_295440 ACA1_165510 ACA1_165510 ACA1_173310 ACA1_173310 ACA1_170770 ACA1_170770 ACA1_095560 ACA1_095560 ACA1_076150 ACA1_076150 ACA1_077140 ACA1_077140 ACA1_096940 ACA1_096940 ACA1_363770 ACA1_363770 ACA1_120560 ACA1_120560 ACA1_171240 ACA1_171240 ACA1_171650 ACA1_171650 ACA1_296880 ACA1_296880 ACA1_074070 ACA1_074070 ACA1_176040 ACA1_176040 LSM8 LSM8 ACA1_290670 ACA1_290670 ACA1_366760 ACA1_366760 ACA1_366660 ACA1_366660 ACA1_365730 ACA1_365730 ACA1_364500 ACA1_364500 ACA1_217170 ACA1_217170 ACA1_106320 ACA1_106320 ACA1_212970 ACA1_212970 ACA1_391650 ACA1_391650 ACA1_390750 ACA1_390750 ACA1_038280 ACA1_038280 ACA1_076920 ACA1_076920 ACA1_339940 ACA1_339940 ACA1_364250 ACA1_364250 ACA1_138820 ACA1_138820 ACA1_322080 ACA1_322080 ACA1_366350 ACA1_366350 ACA1_017740 ACA1_017740 ACA1_367310 ACA1_367310 ACA1_138760 ACA1_138760 ACA1_004870 ACA1_004870 ACA1_334430 ACA1_334430 ACA1_193250 ACA1_193250 ACA1_076790 ACA1_076790 ACA1_354700 ACA1_354700 ACA1_271270 ACA1_271270 ACA1_077250 ACA1_077250 ACA1_390610 ACA1_390610 ACA1_130520 ACA1_130520 ACA1_130970 ACA1_130970 ACA1_215710 ACA1_215710
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_293870Zinc knuckle domain containing protein. (264 aa)
ACA1_296860Putative snoRNA binding domain containing protein. (490 aa)
ACA1_378890Ccr4associated factor, putative. (275 aa)
ACA1_130580Zinc finger, c2h2 type domain containing protein. (873 aa)
ACA1_215480FHA domain containing protein. (387 aa)
ACA1_218700Uncharacterized protein. (888 aa)
ACA1_380780Uncharacterized protein. (774 aa)
ACA1_217700Tetratricopeptide repeat domain containing protein. (781 aa)
ACA1_191540Uncharacterized protein. (245 aa)
ACA1_192060Initiation factor eif4 gamma, middle, putative. (700 aa)
ACA1_212840CROP protein. (410 aa)
ACA1_220630tRNA pseudouridine synthase A, putative. (324 aa)
ACA1_193240DEAD/DEAH box helicase domain containing protein; Belongs to the DEAD box helicase family. (470 aa)
ACA1_275790RNA recognition motif domain containing protein. (792 aa)
ACA1_164080SGT1 protein. (723 aa)
ACA1_390780mRNA cap guanineN7 methyltransferase. (315 aa)
ACA1_220640tRNA pseudouridylate synthase. (180 aa)
ACA1_3251103'5' exonuclease domain containing protein. (317 aa)
ACA1_050870RNA recognition motif domain containing protein. (128 aa)
ACA1_031670tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. (651 aa)
ACA1_051840RNA recognition motif domain containing protein. (622 aa)
ACA1_223050Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
ACA1_211920DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (145 aa)
ACA1_224690DEAD/DEAH box helicase domain containing protein. (972 aa)
ACA1_023820Nuclease domain containing protein. (1049 aa)
ACA1_215730Endo/exonuclease/phosphatase domain-containing protein. (279 aa)
ACA1_219060DWNN domain containing protein. (983 aa)
ACA1_219460MT-A70 protein; Belongs to the MT-A70-like family. (387 aa)
ACA1_331480Membraneassociated ring finger (C3HC4) 2, putative. (210 aa)
ACA1_177250WD domain, G-beta repeat-containing protein. (231 aa)
ACA1_088590Scavenger mrna decapping enzyme (Dcps) protein. (540 aa)
ACA1_164930SKIP/SNW subfamily protein. (615 aa)
ACA1_382380WD domain, G-beta repeat-containing protein. (634 aa)
ACA1_383430Surp module domain containing protein. (671 aa)
ACA1_042040DOM3 exoribonuclease, putative. (422 aa)
ACA1_057390LSM domain containing protein. (204 aa)
ACA1_042680Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (217 aa)
ACA1_043130Putative cleavage and polyadenylation specificity factor, putative. (134 aa)
ACA1_087300Cellulase, putative. (727 aa)
ACA1_224920Uncharacterized protein. (1615 aa)
ACA1_060610Zinc finger protein. (556 aa)
ACA1_0616903' exoribonuclease family, domain 1 domain containing protein. (236 aa)
ACA1_204060Btz domain-containing protein. (347 aa)
ACA1_042000SnRNP core protein SMX5d, putative. (113 aa)
ACA1_060020WD repeat containing protein. (302 aa)
ACA1_060220U5 small nuclear ribonucleoprotein helicase, putative. (2227 aa)
ACA1_063380Splicing factor 3b subunit 1, putative. (1114 aa)
ACA1_061520Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (90 aa)
ACA1_089240Ubiquitin_4 domain-containing protein. (185 aa)
ACA1_058340Ser/Thr phosphatase family superfamily protein. (518 aa)
ACA1_090090Elongation factor Tu GTP binding domain containing protein. (995 aa)
ACA1_208220SAC3/GANP family protein. (646 aa)
ACA1_063910Tho complex subunit 7 protein. (281 aa)
ACA1_065750Uncharacterized protein. (348 aa)
ACA1_043120Putative cleavage and polyadenylation specificity factor, putative. (589 aa)
ACA1_248620DEAD/DEAH box helicase domain containing protein. (469 aa)
ACA1_369110Small nuclear ribonucleoprotein G. (76 aa)
ACA1_207490WD domain, Gbeta repeat, domain containing protein. (528 aa)
ACA1_062670SPRY domain containing protein. (406 aa)
ACA1_369920Cleavage and polyadenylation specificity factor subunit 2. (799 aa)
ACA1_062870PremRNA splicing factor PRP38 family protein. (458 aa)
ACA1_208350PRP1 splicing factor, Nterminal/tetratricopeptide repeat domain containing protein. (946 aa)
ACA1_0839005'3' exoribonuclease, putative. (1117 aa)
ACA1_368870ATPdependent RNA helicase DBP2, putative; Belongs to the DEAD box helicase family. (536 aa)
ACA1_369140PremRNA-splicing factor ATP-dependent RNA helicase PRP16, putative. (1242 aa)
ACA1_029390WD repeat protein. (557 aa)
ACA1_248370DUF1716 domain-containing protein. (599 aa)
ACA1_370100Uncharacterized protein. (331 aa)
ACA1_372070Hepatocellular carcinomaassociated antigen 59, putative. (309 aa)
ACA1_062130Uncharacterized protein. (286 aa)
ACA1_155610RNA recognition motif domain containing protein. (696 aa)
ACA1_041000RRM domain-containing protein. (57 aa)
ACA1_154290TPR_REGION domain-containing protein. (472 aa)
ACA1_155210Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (427 aa)
ACA1_368240Uncharacterized protein. (440 aa)
ACA1_232660Uncharacterized protein. (312 aa)
ACA1_393280Uncharacterized protein. (723 aa)
ACA1_370110Uncharacterized protein. (400 aa)
ACA1_234620Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (462 aa)
ACA1_233080NOT2 / NOT3 / NOT5 family protein. (763 aa)
ACA1_234280Uncharacterized protein. (560 aa)
ACA1_235050RNA ligase, putative. (430 aa)
ACA1_0075105'3' exoribonuclease 2, putative. (81 aa)
ACA1_264400Uncharacterized protein. (689 aa)
ACA1_264860PremRNA processing factor 3 (PRP3) protein. (599 aa)
ACA1_200160DEAD/DEAH box helicase domain containing protein. (906 aa)
ACA1_267310PHDfinger domain containing protein. (468 aa)
ACA1_234310RNA recognition motif domain containing protein. (767 aa)
ACA1_268930PWI domain containing protein. (457 aa)
ACA1_2987903'5' exonuclease domain containing protein. (929 aa)
ACA1_236510KH domain containing protein. (663 aa)
ACA1_112070DnaJ. (318 aa)
ACA1_113440Uncharacterized protein. (449 aa)
ACA1_236140Spliceosomal protein, putative. (316 aa)
ACA1_184610Protein kinase domain containing protein. (905 aa)
ACA1_113910Uncharacterized protein. (1345 aa)
ACA1_114770Protein kinase. (623 aa)
ACA1_115800Uncharacterized protein. (228 aa)
ACA1_267030WD domain, Gbeta repeat-containing protein. (469 aa)
ACA1_115860NOT2 / NOT3 / NOT5 family protein. (701 aa)
ACA1_116510Fbox domain containing protein. (589 aa)
ACA1_201660DEADbox ATP-dependent RNA helicase 35B, putative. (606 aa)
ACA1_117330Hydroxylamine reductase. (646 aa)
ACA1_053270Hydrolase, NUDIX domain containing protein. (597 aa)
ACA1_338770ATPdependent RNA helicase dhx8, putative. (383 aa)
ACA1_114780Cell cycle control protein. (659 aa)
ACA1_279510Transcription elongation factor sii protein n terminal domain containing protein. (738 aa)
ACA1_279760PWI domain containing protein. (693 aa)
ACA1_116470PRP38 premRNA processing factor. (418 aa)
ACA1_116890DNA-directed RNA polymerase II family protein. (151 aa)
ACA1_283440WD repeat protein. (568 aa)
ACA1_195180Coiled-coil domain containing protein 94, putative. (316 aa)
ACA1_195230DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1400 aa)
ACA1_283320PSP, prolinerich, putative. (600 aa)
ACA1_182910RNA recognition motif domain containing protein. (195 aa)
ACA1_054320PremRNA processing splicing factor 8, putative. (2339 aa)
ACA1_282170DEAD/DEAH box helicase domain containing protein. (216 aa)
ACA1_277500Lariat debranching enzyme family protein. (325 aa)
ACA1_277700WD repeat domain 57 (U5 snRNP specific), putative. (345 aa)
ACA1_144810Putative DNA helicase. (1656 aa)
ACA1_354330Uncharacterized protein. (195 aa)
ACA1_389060Protein kinase family protein. (281 aa)
ACA1_354370Nocturnin, putative. (284 aa)
ACA1_317280DEAH (AspGlu-Ala-His) box polypeptide 16, putative. (135 aa)
ACA1_388780EGFlike domain containing protein. (904 aa)
ACA1_389380RNA ligase. (376 aa)
ACA1_389680GCrich sequence DNA-binding factor-like protein. (832 aa)
ACA1_190760Glutathione S-transferase family protein, putative. (241 aa)
ACA1_189590Transcriptional regulatorrelated, putative. (2391 aa)
ACA1_190750DNAdirected RNA polymerase II subunit RPB7, putative. (153 aa)
ACA1_258700Exosc8 protein. (278 aa)
ACA1_261450TrkA Cterminal domain containing protein. (746 aa)
ACA1_362690WD domain containing protein. (440 aa)
ACA1_354490Uncharacterized protein. (88 aa)
ACA1_258290Uncharacterized protein. (95 aa)
ACA1_314230Myblike DNA binding protein, putative. (767 aa)
ACA1_400170WD domain, Gbeta repeat-containing protein. (477 aa)
ACA1_260950Ribonuclease 25A protein. (1111 aa)
ACA1_388770Poly(A) polymerase central domain containing protein. (1230 aa)
ACA1_189300Uncharacterized protein. (239 aa)
ACA1_190630RNA recognition motif domain containing protein. (253 aa)
ACA1_134990Small nuclear ribonucleoprotein Sm D3. (136 aa)
ACA1_101400Splicing factor 3a subunit 2, putative. (229 aa)
ACA1_002780RNA recognition motif domain containing protein. (288 aa)
ACA1_374710WD domain, G-beta repeat-containing protein. (392 aa)
ACA1_140170Helicase conserved Cterminal domain containing protein. (1492 aa)
ACA1_373630RNA recognition motif domain containing protein. (401 aa)
ACA1_261460Leucine Rich Repeatcontaining protein. (246 aa)
ACA1_309610Smad nuclearinteracting protein 1, putative. (108 aa)
ACA1_309660Uncharacterized protein. (632 aa)
ACA1_093050Smu1 suppressor, putative. (495 aa)
ACA1_156200MT-A70 protein; Belongs to the MT-A70-like family. (440 aa)
ACA1_152090Uncharacterized protein. (115 aa)
ACA1_092990Zinc knuckle domain containing protein. (200 aa)
ACA1_093300DEAD/DEAH box helicase domain containing protein. (822 aa)
ACA1_140270Cwf21 protein. (283 aa)
ACA1_094940Cell cycle control proteinrelated, putative. (295 aa)
ACA1_095240RNA recognition motif domain containing protein. (381 aa)
ACA1_098220Endo/exonuclease/phosphatase domain-containing protein. (477 aa)
ACA1_349660BAT1 protein. (464 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (131 aa)
ACA1_100500KOW motif domain containing protein. (491 aa)
ACA1_100650Zinc finger, C3HC4 type (RING finger) domain containing protein. (459 aa)
ACA1_020090Cleavage stimulation factor 64kDa subunit. (84 aa)
ACA1_244090SNRNP27 domain-containing protein. (237 aa)
ACA1_230320CUGbinding protein LYLQ isoform, putative. (106 aa)
ACA1_384000Dihydrouridine synthase (Dus). (354 aa)
ACA1_281200MOR2-PAG1_mid domain-containing protein. (1990 aa)
ACA1_182870G patch domain containing protein 1, putative. (919 aa)
ACA1_125980ATPdependent RNA helicase DHX8, putative. (1165 aa)
ACA1_157270DEAD box RNA helicase; Belongs to the DEAD box helicase family. (596 aa)
ACA1_158500Hydrolase nudix family protein. (388 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
ACA1_230430RNA recognition motif domain containing protein. (229 aa)
ACA1_251330U11/U12 snRNP 48K, putative. (354 aa)
ACA1_142620ATPdependent RNA helicase dbp2, putative; Belongs to the DEAD box helicase family. (706 aa)
ACA1_254420Dcp1 family decapping family protein. (510 aa)
ACA1_149270MIF4G domain containing protein. (597 aa)
ACA1_149420Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)
ACA1_046150Cactin, putative. (607 aa)
ACA1_157280SYF2 splicing factor, putative. (264 aa)
ACA1_396210U4/U6 small nuclear ribonucleoprotein Prp4, putative. (511 aa)
ACA1_012330WD domain, G-beta repeat-containing protein. (1186 aa)
ACA1_141880RNA editing ligase. (409 aa)
ACA1_159130Uncharacterized protein. (270 aa)
ACA1_159840CCDC49 protein. (566 aa)
ACA1_360000mRNA capping enzyme, catalytic domain containing protein. (622 aa)
ACA1_360050Zinc finger domain containing protein. (294 aa)
ACA1_3603003' exoribonuclease family, domain 1 domain containing protein. (274 aa)
ACA1_252870RNA recognition motif domain containing protein. (375 aa)
ACA1_361290Zinc finger domain containing protein. (256 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (135 aa)
ACA1_069240tRNA pseudouridine synthase B, putative. (255 aa)
ACA1_142690Pinin/SDK/memA/ protein region protein, putative. (374 aa)
ACA1_070160Tetratricopeptide repeat-containing protein. (796 aa)
ACA1_070640RNA recognition motif domain containing protein. (348 aa)
ACA1_074460RNA recognition domain containing protein. (985 aa)
ACA1_072190Poly(A)-specific ribonuclease. (501 aa)
ACA1_072540Smlike protein LSm6, putative. (84 aa)
ACA1_072170Poly(A)specific ribonuclease subunit protein, putative. (1048 aa)
ACA1_396970mRNA capping enzyme, large subunit. (857 aa)
ACA1_196320FHA domain containing protein. (900 aa)
ACA1_075260Uncharacterized protein. (178 aa)
ACA1_074420Putative N6adenosine-methyltransferase; Belongs to the MT-A70-like family. (1067 aa)
ACA1_075290rRNA pseudouridine synthase, putative. (523 aa)
ACA1_144380Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1378 aa)
ACA1_166100WD domain, G-beta repeat-containing protein. (744 aa)
ACA1_072200RNA recognition motif domain containing protein. (355 aa)
ACA1_072300RNA recognition motif domain containing protein. (200 aa)
ACA1_376220Breast carcinoma amplified sequence 2 (Bcas2) protein. (250 aa)
ACA1_073070Exosome component 3, putative. (233 aa)
ACA1_153600tRNA pseudouridine synthase. (488 aa)
ACA1_170960Uncharacterized protein. (981 aa)
ACA1_376250PHD finger protein. (110 aa)
ACA1_197080AAA_12 domain-containing protein. (235 aa)
ACA1_071980CCCHtype Zn finger-containing protein. (284 aa)
ACA1_074600Leucine rich repeat domain containing protein. (557 aa)
ACA1_174450Cwf15/Cwc15 cell cycle control protein. (231 aa)
ACA1_073350AAR2 protein. (363 aa)
ACA1_175490Variant sh3 domain containing protein. (688 aa)
ACA1_006240RNA polymerase II subunit A Cterminal domain phosphatase SSU72, putative. (200 aa)
ACA1_144390Leucine rich repeat domain containing protein. (357 aa)
ACA1_153070DnaJ domain containing protein. (317 aa)
ACA1_272550RNA recognition motif domain containing protein. (647 aa)
ACA1_289060Uncharacterized protein. (518 aa)
ACA1_289720U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (220 aa)
ACA1_291020Exosome complex exonuclease rrp41, putative. (205 aa)
ACA1_333280Gpatch domain containing protein. (345 aa)
ACA1_291620DNAdirected RNA polymerase II subunit rpb4, putative. (135 aa)
ACA1_030740Znfinger in Ran binding protein. (732 aa)
ACA1_170950DWNN domain containing protein. (77 aa)
ACA1_295440Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (125 aa)
ACA1_165510WD40 repeat-containing protein. (314 aa)
ACA1_173310MIF4G domain containing protein. (1361 aa)
ACA1_170770Ubiquitin specific protease 39 and snrnp assembly factor, putative. (262 aa)
ACA1_095560Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (401 aa)
ACA1_076150Ubiquitin family protein 5, putative. (248 aa)
ACA1_077140Nuclear cap-binding protein subunit 2. (244 aa)
ACA1_096940Uncharacterized protein. (404 aa)
ACA1_363770TPR_REGION domain-containing protein. (640 aa)
ACA1_120560U2 snRNP component prp10, putative. (146 aa)
ACA1_171240Ribosomal protein L7Ae protein. (381 aa)
ACA1_171650Exosome component 7, putative. (263 aa)
ACA1_296880Uncharacterized protein. (254 aa)
ACA1_074070PAS domain-containing protein. (777 aa)
ACA1_176040Zinc knuckle domain containing protein. (263 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
ACA1_290670Sm domain-containing protein. (96 aa)
ACA1_366760RNA recognition motif domain containing protein. (239 aa)
ACA1_366660Nocturnin, putative. (433 aa)
ACA1_365730Tetratricopeptide repeat domain containing protein. (958 aa)
ACA1_364500EH-binding protein, putative. (518 aa)
ACA1_217170Microfibrillar associated protein. (531 aa)
ACA1_106320Uncharacterized protein. (483 aa)
ACA1_212970Uncharacterized protein. (89 aa)
ACA1_391650Catalytic, putative. (150 aa)
ACA1_390750zf-C2H2_jaz domain-containing protein. (181 aa)
ACA1_038280Splicing factor 3b subunit 3, putative. (1227 aa)
ACA1_076920SPRY domain containing protein. (589 aa)
ACA1_339940Tetratricopeptide repeat domain containing protein. (791 aa)
ACA1_3642503' exoribonuclease family, domain 1 domain containing protein. (524 aa)
ACA1_138820C2H2-type domain-containing protein. (747 aa)
ACA1_322080RNA recognition motif domain containing protein. (458 aa)
ACA1_366350MTA70 family protein; Belongs to the MT-A70-like family. (289 aa)
ACA1_0177405'-3' exoribonuclease 1. (1421 aa)
ACA1_367310Zinc knuckle domain containing protein. (862 aa)
ACA1_138760U2 snRNP auxilliary factor, large subunit, splicing factor subfamily protein. (462 aa)
ACA1_004870Pre-mRNA-splicing factor prp1, putative. (144 aa)
ACA1_334430SNF, putative. (65 aa)
ACA1_193250WD40 repeat family protein. (434 aa)
ACA1_0767905'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1110 aa)
ACA1_354700Uncharacterized protein. (243 aa)
ACA1_271270Atpdependent rna helicase ddx6, putative; Belongs to the DEAD box helicase family. (407 aa)
ACA1_077250mRNA decay factorlike protein. (1142 aa)
ACA1_390610Splicing factor 3b subunit 5, putative. (73 aa)
ACA1_130520CPSF A subunit region protein. (1477 aa)
ACA1_130970THO2 protein. (1521 aa)
ACA1_215710RRM_1 domain-containing protein. (98 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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