32 items (Acanthamoeba castellanii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACA1_048080	RNA binding protein, putative. (838 aa)
	ACA1_095100	UTP23, small subunit (SSU) processome component family protein. (325 aa)
	ACA1_097000	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (242 aa)
	ACA1_094680	Ribosomal protein L11, domain containing protein; Belongs to the universal ribosomal protein uL11 family. (173 aa)
	ACA1_094930	Ribosomal protein L6, putative. (189 aa)
	ACA1_097570	Uncharacterized protein. (814 aa)
	ACA1_365780	Ribosomal protein S4, putative; Belongs to the universal ribosomal protein uS4 family. (188 aa)
	ACA1_271380	Ribosomal protein L10, putative. (329 aa)
	ACA1_276860	Ribonuclease, putative. (171 aa)
	ACA1_378220	Ribosomal L18p/L5e family. (291 aa)
	ACA1_164710	Ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL23 family. (210 aa)
	ACA1_204570	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (316 aa)
	ACA1_178320	40S ribosomal protein S9. (184 aa)
	ACA1_061910	Ribosomal protein S18, putative. (458 aa)
	ACA1_203760	60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	ACA1_368030	Brix domain containing protein. (353 aa)
	ACA1_061660	Ribosomal L5P family Cterminus, putative; Belongs to the universal ribosomal protein uL5 family. (192 aa)
	ACA1_138320	Brix domain containing protein. (505 aa)
	ACA1_138470	Ribosomal protein L12e, putative. (250 aa)
	ACA1_064830	Nkap_C domain-containing protein. (514 aa)
	ACA1_052200	Ribosome biogenesis GTPase Era, putative. (327 aa)
	ACA1_251460	U3 small nucleolar ribonucleoprotein component, putative. (277 aa)
	ACA1_034540	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family. (162 aa)
	ACA1_046430	Ribosomal protein L20, putative; Belongs to the bacterial ribosomal protein bL20 family. (154 aa)
	ACA1_141790	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (460 aa)
	ACA1_149890	Ribosomal protein S7p/S5e, putative; Belongs to the universal ribosomal protein uS7 family. (198 aa)
	ACA1_361260	Brix domain containing 2, putative. (294 aa)
	ACA1_173180	EMG1 nucleolar protein, putative. (227 aa)
	ACA1_143610	Ribosomal protein S17, putative. (197 aa)
	ACA1_174430	Ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	ACA1_292860	ABC transporter related, putative. (593 aa)
	ACA1_291360	Ribosomal protein S11, putative. (77 aa)

Your Current Organism:

Acanthamoeba castellanii

NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACA1_034540	ACA1_046430	L8HAU5	L8HB15	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L20, putative; Belongs to the bacterial ribosomal protein bL20 family.	0.999
ACA1_034540	ACA1_061660	L8HAU5	L8GZ94	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal L5P family Cterminus, putative; Belongs to the universal ribosomal protein uL5 family.	0.999
ACA1_034540	ACA1_094680	L8HAU5	L8GJF0	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L11, domain containing protein; Belongs to the universal ribosomal protein uL11 family.	0.953
ACA1_034540	ACA1_094930	L8HAU5	L8GJF7	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L6, putative.	0.999
ACA1_034540	ACA1_097000	L8HAU5	L8GJ32	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
ACA1_034540	ACA1_138470	L8HAU5	L8GZJ5	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L12e, putative.	0.953
ACA1_034540	ACA1_143610	L8HAU5	L8HHR8	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein S17, putative.	0.996
ACA1_034540	ACA1_149890	L8HAU5	L8HC77	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein S7p/S5e, putative; Belongs to the universal ribosomal protein uS7 family.	0.999
ACA1_034540	ACA1_164710	L8HAU5	L8GRL5	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL23 family.	0.999
ACA1_034540	ACA1_173180	L8HAU5	L8HHN9	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	EMG1 nucleolar protein, putative.	0.932
ACA1_034540	ACA1_174430	L8HAU5	L8HHU3	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS15 family.	0.999
ACA1_034540	ACA1_178320	L8HAU5	L8GU91	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	40S ribosomal protein S9.	0.996
ACA1_034540	ACA1_203760	L8HAU5	L8GW62	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	60S ribosomal protein L23, putative; Belongs to the universal ribosomal protein uL14 family.	0.999
ACA1_034540	ACA1_251460	L8HAU5	L8HAP6	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	U3 small nucleolar ribonucleoprotein component, putative.	0.925
ACA1_034540	ACA1_271380	L8HAU5	L8GPQ3	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L10, putative.	0.999
ACA1_034540	ACA1_291360	L8HAU5	L8HKY5	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein S11, putative.	0.999
ACA1_034540	ACA1_292860	L8HAU5	L8HJL2	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	ABC transporter related, putative.	0.738
ACA1_034540	ACA1_365780	L8HAU5	L8GLU0	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein S4, putative; Belongs to the universal ribosomal protein uS4 family.	0.999
ACA1_034540	ACA1_378220	L8HAU5	L8GRC7	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	Ribosomal L18p/L5e family.	0.999
ACA1_046430	ACA1_034540	L8HB15	L8HAU5	Ribosomal protein L20, putative; Belongs to the bacterial ribosomal protein bL20 family.	Ribosomal protein S13p/S18e, putative; Belongs to the universal ribosomal protein uS13 family.	0.999

page 1 of 26

Server load: medium (44%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About