STRINGSTRING
ACA1_180800 ACA1_180800 ACA1_136630 ACA1_136630 ACA1_362640 ACA1_362640 ACA1_097570 ACA1_097570 ACA1_365100 ACA1_365100 ACA1_220510 ACA1_220510 ACA1_188870 ACA1_188870 ACA1_178320 ACA1_178320 ACA1_064830 ACA1_064830 ACA1_037110 ACA1_037110 ACA1_000210 ACA1_000210 ACA1_198580 ACA1_198580 ACA1_052390 ACA1_052390 ACA1_194930 ACA1_194930 ACA1_251460 ACA1_251460 ACA1_360220 ACA1_360220 ACA1_144400 ACA1_144400 ACA1_287860 ACA1_287860 ACA1_291690 ACA1_291690 ACA1_295370 ACA1_295370
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_180800Nucleolar protein Nop56, putative. (517 aa)
ACA1_136630Bystin, putative. (345 aa)
ACA1_362640H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (204 aa)
ACA1_097570Uncharacterized protein. (814 aa)
ACA1_365100U3 small nucleolar RNA-associated protein 6 protein. (628 aa)
ACA1_220510U3 small nucleolar RNA-associated protein 15 family protein. (507 aa)
ACA1_188870Bystin, putative. (289 aa)
ACA1_17832040S ribosomal protein S9. (184 aa)
ACA1_064830Nkap_C domain-containing protein. (514 aa)
ACA1_037110Bms1-type G domain-containing protein. (863 aa)
ACA1_000210H/ACA ribonucleoprotein complex subunit 3, putative. (64 aa)
ACA1_198580Transducin family protein. (480 aa)
ACA1_052390Nucleolar protein, putative. (601 aa)
ACA1_194930Matrix attachment region binding protein. (525 aa)
ACA1_251460U3 small nucleolar ribonucleoprotein component, putative. (277 aa)
ACA1_360220Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (140 aa)
ACA1_144400WD repeat protein WDR3, putative. (1010 aa)
ACA1_287860BP28CT domain-containing protein. (2409 aa)
ACA1_291690Nop14 family protein. (938 aa)
ACA1_295370Ribosome biogenesis protein. (1180 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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