STRINGSTRING
ACA1_182980 ACA1_182980 ACA1_150010 ACA1_150010 ACA1_055520 ACA1_055520 ACA1_061100 ACA1_061100 ACA1_178480 ACA1_178480 ACA1_260060 ACA1_260060
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_182980SEC13, putative; Belongs to the WD repeat SEC13 family. (310 aa)
ACA1_150010Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (681 aa)
ACA1_055520Nucleoporin, putative. (360 aa)
ACA1_061100SEC13like protein; Belongs to the WD repeat SEC13 family. (289 aa)
ACA1_178480Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (885 aa)
ACA1_260060Sec13like protein; Belongs to the WD repeat SEC13 family. (201 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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