STRINGSTRING
ACA1_365100 ACA1_365100 ACA1_065980 ACA1_065980 ACA1_144400 ACA1_144400 ACA1_237290 ACA1_237290
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_365100U3 small nucleolar RNA-associated protein 6 protein. (628 aa)
ACA1_065980Periodic tryptophan protein 2, putative. (940 aa)
ACA1_144400WD repeat protein WDR3, putative. (1010 aa)
ACA1_237290Utp21 domain-containing protein. (214 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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