STRINGSTRING
ACA1_220320 ACA1_220320 ACA1_220510 ACA1_220510 ACA1_287860 ACA1_287860 ACA1_061540 ACA1_061540
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_220320U3 small nucleolar RNA-associated protein 15, putative. (121 aa)
ACA1_220510U3 small nucleolar RNA-associated protein 15 family protein. (507 aa)
ACA1_287860BP28CT domain-containing protein. (2409 aa)
ACA1_061540WD domain, G-beta repeat-containing protein. (1035 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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