STRINGSTRING
ACA1_109080 ACA1_109080 ACA1_323170 ACA1_323170 ACA1_136630 ACA1_136630 ACA1_258250 ACA1_258250 ACA1_258240 ACA1_258240 ACA1_095100 ACA1_095100 ACA1_097580 ACA1_097580 ACA1_365100 ACA1_365100 ACA1_216450 ACA1_216450 ACA1_188870 ACA1_188870 ACA1_178320 ACA1_178320 ACA1_383730 ACA1_383730 ACA1_065980 ACA1_065980 ACA1_037110 ACA1_037110 ACA1_232030 ACA1_232030 ACA1_266810 ACA1_266810 ACA1_267040 ACA1_267040 ACA1_198580 ACA1_198580 ACA1_199040 ACA1_199040 ACA1_237290 ACA1_237290 ACA1_266780 ACA1_266780 ACA1_195020 ACA1_195020 ACA1_052630 ACA1_052630 ACA1_098430 ACA1_098430 ACA1_227010 ACA1_227010 ACA1_183040 ACA1_183040 ACA1_228790 ACA1_228790 ACA1_251460 ACA1_251460 ACA1_254040 ACA1_254040 ACA1_149220 ACA1_149220 ACA1_149420 ACA1_149420 ACA1_158170 ACA1_158170 ACA1_251530 ACA1_251530 ACA1_195560 ACA1_195560 ACA1_072290 ACA1_072290 ACA1_144400 ACA1_144400 ACA1_143800 ACA1_143800 ACA1_376230 ACA1_376230 ACA1_174150 ACA1_174150 ACA1_291690 ACA1_291690
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_109080Nucleolar RNAassociated protein alpha isoform, putative. (457 aa)
ACA1_323170Utp14 protein. (907 aa)
ACA1_136630Bystin, putative. (345 aa)
ACA1_258250KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (406 aa)
ACA1_258240KH domain containing protein. (100 aa)
ACA1_095100UTP23, small subunit (SSU) processome component family protein. (325 aa)
ACA1_097580Uncharacterized protein. (375 aa)
ACA1_365100U3 small nucleolar RNA-associated protein 6 protein. (628 aa)
ACA1_216450Protein MAK16 homolog; Belongs to the MAK16 family. (285 aa)
ACA1_188870Bystin, putative. (289 aa)
ACA1_17832040S ribosomal protein S9. (184 aa)
ACA1_383730Uncharacterized protein. (235 aa)
ACA1_065980Periodic tryptophan protein 2, putative. (940 aa)
ACA1_037110Bms1-type G domain-containing protein. (863 aa)
ACA1_232030Block of proliferation 1, putative. (210 aa)
ACA1_266810Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (575 aa)
ACA1_267040Nin one binding (NOB1) Zn-ribbon family protein. (641 aa)
ACA1_198580Transducin family protein. (480 aa)
ACA1_199040Pumiliofamily RNA binding repeat domain containing protein. (848 aa)
ACA1_237290Utp21 domain-containing protein. (214 aa)
ACA1_266780Ribosomal RNA large subunit methyltransferase J, putative. (777 aa)
ACA1_195020CBF/Mak21 family protein. (768 aa)
ACA1_052630Uncharacterized protein. (308 aa)
ACA1_098430Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (739 aa)
ACA1_227010U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (222 aa)
ACA1_183040U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (656 aa)
ACA1_228790IgA-specific serine endopeptidase. (604 aa)
ACA1_251460U3 small nucleolar ribonucleoprotein component, putative. (277 aa)
ACA1_254040RIO1 family protein. (390 aa)
ACA1_149220Sas10 Cterminal domain containing protein. (137 aa)
ACA1_149420Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)
ACA1_158170Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (541 aa)
ACA1_251530PINc domain-containing protein. (207 aa)
ACA1_195560RIO1 family/Rio2, Nterminal domain containing protein. (521 aa)
ACA1_072290Low temperature viability protein. (922 aa)
ACA1_144400WD repeat protein WDR3, putative. (1010 aa)
ACA1_143800Ribosome biogenesis protein nop16 protein. (191 aa)
ACA1_376230NUC153 domain-containing protein. (641 aa)
ACA1_174150RRP7 domain-containing protein. (383 aa)
ACA1_291690Nop14 family protein. (938 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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