STRINGSTRING
ACA1_251460 ACA1_251460 ACA1_291690 ACA1_291690 ACA1_144400 ACA1_144400 ACA1_109080 ACA1_109080 ACA1_174150 ACA1_174150 ACA1_365100 ACA1_365100 ACA1_178320 ACA1_178320 ACA1_065980 ACA1_065980 ACA1_232030 ACA1_232030 ACA1_237290 ACA1_237290 ACA1_195020 ACA1_195020 ACA1_052630 ACA1_052630 ACA1_098430 ACA1_098430 ACA1_183040 ACA1_183040 ACA1_158170 ACA1_158170
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_251460U3 small nucleolar ribonucleoprotein component, putative. (277 aa)
ACA1_291690Nop14 family protein. (938 aa)
ACA1_144400WD repeat protein WDR3, putative. (1010 aa)
ACA1_109080Nucleolar RNAassociated protein alpha isoform, putative. (457 aa)
ACA1_174150RRP7 domain-containing protein. (383 aa)
ACA1_365100U3 small nucleolar RNA-associated protein 6 protein. (628 aa)
ACA1_17832040S ribosomal protein S9. (184 aa)
ACA1_065980Periodic tryptophan protein 2, putative. (940 aa)
ACA1_232030Block of proliferation 1, putative. (210 aa)
ACA1_237290Utp21 domain-containing protein. (214 aa)
ACA1_195020CBF/Mak21 family protein. (768 aa)
ACA1_052630Uncharacterized protein. (308 aa)
ACA1_098430Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (739 aa)
ACA1_183040U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (656 aa)
ACA1_158170Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (541 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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