30 items (Acanthamoeba castellanii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACA1_379240	K+ channel tetramerisation subfamily protein. (320 aa)
	ACA1_320990	K+ channel tetramerisation subfamily protein. (381 aa)
	ACA1_223290	K+ channel tetramerisation subfamily protein. (316 aa)
	ACA1_050340	K+ channel tetramerisation subfamily protein. (1182 aa)
	ACA1_174060	K+ channel tetramerisation subfamily protein. (508 aa)
	ACA1_389320	K+ channel tetramerisation subfamily protein. (467 aa)
	ACA1_247120	K+ channel tetramerisation subfamily protein. (442 aa)
	ACA1_131050	K+ channel tetramerisation subfamily protein. (535 aa)
	ACA1_111200	K+ channel tetramerisation subfamily protein. (371 aa)
	ACA1_325470	K+ channel tetramerisation subfamily protein. (269 aa)
	ACA1_373060	K+ channel tetramerisation subfamily protein. (324 aa)
	ACA1_364290	K+ channel tetramerisation subfamily protein. (261 aa)
	ACA1_276630	K+ channel tetramerisation subfamily protein. (720 aa)
	ACA1_056900	K+ channel tetramerisation subfamily protein. (83 aa)
	ACA1_111700	K+ channel tetramerisation subfamily protein. (284 aa)
	ACA1_307810	K+ channel tetramerisation subfamily protein. (505 aa)
	ACA1_192120	K+ channel tetramerisation subfamily protein. (1140 aa)
	ACA1_215680	BTB_2 domain-containing protein. (131 aa)
	ACA1_371450	K+ channel tetramerisation subfamily protein. (252 aa)
	ACA1_117160	K+ channel tetramerisation subfamily protein. (570 aa)
	ACA1_322410	K+ channel tetramerisation subfamily protein. (235 aa)
	ACA1_190640	K+ channel tetramerisation subfamily protein. (210 aa)
	ACA1_381550	K+ channel tetramerisation subfamily protein. (333 aa)
	ACA1_000570	K+ channel tetramerisation subfamily protein. (263 aa)
	ACA1_368820	K+ channel tetramerisation subfamily protein. (468 aa)
	ACA1_112660	K+ channel tetramerisation domain containing protein. (1326 aa)
	ACA1_075400	K+ channel tetramerisation subfamily protein. (160 aa)
	ACA1_090800	K+ channel tetramerisation subfamily protein. (234 aa)
	ACA1_265470	Pentapeptide repeat domain containing protein. (315 aa)
	ACA1_178090	BTB_2 domain-containing protein. (206 aa)

Your Current Organism:

Acanthamoeba castellanii

NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACA1_075400	ACA1_174060	M0QSU6	M0QSG3	K+ channel tetramerisation subfamily protein.	K+ channel tetramerisation subfamily protein.	0.406
ACA1_075400	ACA1_371450	M0QSU6	M0QSP5	K+ channel tetramerisation subfamily protein.	K+ channel tetramerisation subfamily protein.	0.484
ACA1_075400	ACA1_373060	M0QSU6	M0QSM8	K+ channel tetramerisation subfamily protein.	K+ channel tetramerisation subfamily protein.	0.417
ACA1_174060	ACA1_075400	M0QSG3	M0QSU6	K+ channel tetramerisation subfamily protein.	K+ channel tetramerisation subfamily protein.	0.406
ACA1_371450	ACA1_075400	M0QSP5	M0QSU6	K+ channel tetramerisation subfamily protein.	K+ channel tetramerisation subfamily protein.	0.484
ACA1_373060	ACA1_075400	M0QSM8	M0QSU6	K+ channel tetramerisation subfamily protein.	K+ channel tetramerisation subfamily protein.	0.417

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