STRINGSTRING
ACA1_006790 ACA1_006790 ACA1_384660 ACA1_384660 ACA1_165390 ACA1_165390 ACA1_165500 ACA1_165500 ACA1_110070 ACA1_110070 ACA1_265870 ACA1_265870 ACA1_127610 ACA1_127610 ACA1_261010 ACA1_261010 ACA1_076980 ACA1_076980 ACA1_391500 ACA1_391500 ACA1_164900 ACA1_164900 ACA1_001870 ACA1_001870 ACA1_248850 ACA1_248850 ACA1_064220 ACA1_064220 ACA1_036960 ACA1_036960 ACA1_265860 ACA1_265860
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_006790Uncharacterized protein. (183 aa)
ACA1_384660Retinoblastoma binding protein 4 variant isoform 1, putative. (419 aa)
ACA1_165390F-box domain containing protein. (294 aa)
ACA1_165500Histone acetyltransferase type b catalytic subunit. (425 aa)
ACA1_110070Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (487 aa)
ACA1_265870Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (110 aa)
ACA1_127610Core histone h2a/h2b/h3/h4 superfamily protein; Belongs to the histone H2B family. (1601 aa)
ACA1_261010Transcription initiation factor IID, 18kD subunit. (296 aa)
ACA1_076980RuvB-like helicase; Belongs to the RuvB family. (460 aa)
ACA1_391500Angiotonin transactivated protein 1 isoform 2, putative. (254 aa)
ACA1_164900Bromodomain domain containing protein. (939 aa)
ACA1_001870Histone cluster 1, H2bb, putative; Belongs to the histone H2B family. (105 aa)
ACA1_248850Myb, DNA-binding domain containing protein. (183 aa)
ACA1_064220Uncharacterized protein. (356 aa)
ACA1_036960Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1309 aa)
ACA1_265860Histone H2B; Belongs to the histone H2B family. (163 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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