33 items (Acanthamoeba castellanii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	ACA1_396530	Nucleoporin 54, putative. (240 aa)
	ACA1_189310	RanBP2-type domain-containing protein. (986 aa)
	ACA1_136310	Uncharacterized protein. (873 aa)
	ACA1_136200	Uncharacterized protein. (820 aa)
	ACA1_091430	Znfinger in Ran binding protein and others domain containing protein. (1671 aa)
	ACA1_091410	Nucleoporin, putative. (1803 aa)
	ACA1_240350	Nuclear pore complexassociated protein TPR, putative. (1990 aa)
	ACA1_366110	MPPN (Rrmlike) domain containing protein. (304 aa)
	ACA1_366540	Uncharacterized protein. (333 aa)
	ACA1_082150	Uncharacterized protein. (1724 aa)
	ACA1_391600	Uncharacterized protein. (1473 aa)
	ACA1_221010	Fbox domain containing protein. (457 aa)
	ACA1_189200	Nucleoporin protein. (303 aa)
	ACA1_178480	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (885 aa)
	ACA1_090250	RNA export 1, putative. (335 aa)
	ACA1_189090	Nucleoporin, putative. (687 aa)
	ACA1_042030	Sumo domain containing protein. (487 aa)
	ACA1_060910	Uncharacterized protein. (569 aa)
	ACA1_119840	Ubiquitinlike protein. (104 aa)
	ACA1_040510	Ubiquitin domain containing protein. (414 aa)
	ACA1_209870	Uncharacterized protein. (588 aa)
	ACA1_112580	Nuclear pore glycoprotein p62, putative. (571 aa)
	ACA1_055520	Nucleoporin, putative. (360 aa)
	ACA1_158450	Ubiquitinconjugating enzyme, putative; Belongs to the ubiquitin-conjugating enzyme family. (141 aa)
	ACA1_070550	Nucleoporin, putative. (1450 aa)
	ACA1_150010	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (681 aa)
	ACA1_175520	KID repeat-containing protein. (2879 aa)
	ACA1_265870	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (110 aa)
	ACA1_289880	Uncharacterized protein. (848 aa)
	ACA1_296720	Histone deacetylase 1, putative. (328 aa)
	ACA1_291340	Sumo domain-containing protein. (133 aa)
	ACA1_291540	Nuclear pore protein. (823 aa)
	ACA1_296610	Type-1 histone deacetylase 1, putative. (199 aa)

Your Current Organism:

Acanthamoeba castellanii

NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACA1_040510	ACA1_042030	L8H0I4	L8GXQ3	Ubiquitin domain containing protein.	Sumo domain containing protein.	0.879
ACA1_040510	ACA1_055520	L8H0I4	L8H8J3	Ubiquitin domain containing protein.	Nucleoporin, putative.	0.644
ACA1_040510	ACA1_070550	L8H0I4	L8HDY8	Ubiquitin domain containing protein.	Nucleoporin, putative.	0.658
ACA1_040510	ACA1_082150	L8H0I4	L8GMN3	Ubiquitin domain containing protein.	Uncharacterized protein.	0.529
ACA1_040510	ACA1_090250	L8H0I4	L8GUX3	Ubiquitin domain containing protein.	RNA export 1, putative.	0.656
ACA1_040510	ACA1_091410	L8H0I4	L8GKD2	Ubiquitin domain containing protein.	Nucleoporin, putative.	0.646
ACA1_040510	ACA1_091430	L8H0I4	L8GIS2	Ubiquitin domain containing protein.	Znfinger in Ran binding protein and others domain containing protein.	0.957
ACA1_040510	ACA1_112580	L8H0I4	L8H349	Ubiquitin domain containing protein.	Nuclear pore glycoprotein p62, putative.	0.451
ACA1_040510	ACA1_119840	L8H0I4	L8GYI1	Ubiquitin domain containing protein.	Ubiquitinlike protein.	0.879
ACA1_040510	ACA1_150010	L8H0I4	L8HEH3	Ubiquitin domain containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.665
ACA1_040510	ACA1_178480	L8H0I4	L8GSL4	Ubiquitin domain containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.706
ACA1_040510	ACA1_189310	L8H0I4	L8GE20	Ubiquitin domain containing protein.	RanBP2-type domain-containing protein.	0.666
ACA1_040510	ACA1_221010	L8H0I4	L8GQP9	Ubiquitin domain containing protein.	Fbox domain containing protein.	0.529
ACA1_040510	ACA1_265870	L8H0I4	L8HII7	Ubiquitin domain containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.689
ACA1_040510	ACA1_289880	L8H0I4	L8HJ68	Ubiquitin domain containing protein.	Uncharacterized protein.	0.451
ACA1_040510	ACA1_291340	L8H0I4	L8HLN7	Ubiquitin domain containing protein.	Sumo domain-containing protein.	0.879
ACA1_040510	ACA1_291540	L8H0I4	L8HLP6	Ubiquitin domain containing protein.	Nuclear pore protein.	0.700
ACA1_040510	ACA1_296610	L8H0I4	L8HMF2	Ubiquitin domain containing protein.	Type-1 histone deacetylase 1, putative.	0.503
ACA1_040510	ACA1_296720	L8H0I4	L8HK34	Ubiquitin domain containing protein.	Histone deacetylase 1, putative.	0.503
ACA1_040510	ACA1_366110	L8H0I4	L8GLP4	Ubiquitin domain containing protein.	MPPN (Rrmlike) domain containing protein.	0.658

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