STRINGSTRING
ACA1_077140 ACA1_077140 ACA1_388780 ACA1_388780 ACA1_261450 ACA1_261450 ACA1_388770 ACA1_388770 ACA1_190630 ACA1_190630 ACA1_134990 ACA1_134990 ACA1_374710 ACA1_374710 ACA1_020090 ACA1_020090 ACA1_130520 ACA1_130520 ACA1_217700 ACA1_217700 ACA1_192060 ACA1_192060 ACA1_382380 ACA1_382380 ACA1_057390 ACA1_057390 ACA1_042680 ACA1_042680 ACA1_043130 ACA1_043130 ACA1_061520 ACA1_061520 ACA1_043120 ACA1_043120 ACA1_369110 ACA1_369110 ACA1_369920 ACA1_369920 ACA1_155610 ACA1_155610 ACA1_155210 ACA1_155210 ACA1_071980 ACA1_071980
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_077140Nuclear cap-binding protein subunit 2. (244 aa)
ACA1_388780EGFlike domain containing protein. (904 aa)
ACA1_261450TrkA Cterminal domain containing protein. (746 aa)
ACA1_388770Poly(A) polymerase central domain containing protein. (1230 aa)
ACA1_190630RNA recognition motif domain containing protein. (253 aa)
ACA1_134990Small nuclear ribonucleoprotein Sm D3. (136 aa)
ACA1_374710WD domain, G-beta repeat-containing protein. (392 aa)
ACA1_020090Cleavage stimulation factor 64kDa subunit. (84 aa)
ACA1_130520CPSF A subunit region protein. (1477 aa)
ACA1_217700Tetratricopeptide repeat domain containing protein. (781 aa)
ACA1_192060Initiation factor eif4 gamma, middle, putative. (700 aa)
ACA1_382380WD domain, G-beta repeat-containing protein. (634 aa)
ACA1_057390LSM domain containing protein. (204 aa)
ACA1_042680Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (217 aa)
ACA1_043130Putative cleavage and polyadenylation specificity factor, putative. (134 aa)
ACA1_061520Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (90 aa)
ACA1_043120Putative cleavage and polyadenylation specificity factor, putative. (589 aa)
ACA1_369110Small nuclear ribonucleoprotein G. (76 aa)
ACA1_369920Cleavage and polyadenylation specificity factor subunit 2. (799 aa)
ACA1_155610RNA recognition motif domain containing protein. (696 aa)
ACA1_155210Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (427 aa)
ACA1_071980CCCHtype Zn finger-containing protein. (284 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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