99 items (Acanthamoeba castellanii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACA1_087350	Protein prenyltransferase, putative. (456 aa)
	ACA1_087400	Ras subfamily protein. (241 aa)
	ACA1_087450	Ras subfamily protein. (536 aa)
	ACA1_057810	Ras subfamily protein. (482 aa)
	ACA1_383090	Ras subfamily protein. (439 aa)
	ACA1_064400	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (407 aa)
	ACA1_087380	Ras subfamily protein. (446 aa)
	ACA1_063060	Ras family GTP-binding protein YPT1. (209 aa)
	ACA1_089990	Ras subfamily protein. (249 aa)
	ACA1_383740	GTPbinding protein YPTC5, putative. (197 aa)
	ACA1_057130	Ras subfamily protein. (353 aa)
	ACA1_062920	Rab1, putative. (179 aa)
	ACA1_369720	Ras subfamily protein. (216 aa)
	ACA1_174900	Rasrelated protein Rab-32, putative. (216 aa)
	ACA1_074580	Rasrelated protein Rab-7, putative. (186 aa)
	ACA1_109750	Lightoid family protein. (216 aa)
	ACA1_175130	Rab8/RabEfamily small GTPase, putative. (208 aa)
	ACA1_075010	Ras family protein. (187 aa)
	ACA1_376480	RabE family small GTPase. (155 aa)
	ACA1_326130	Ras subfamily protein. (163 aa)
	ACA1_143990	Ras subfamily protein. (231 aa)
	ACA1_075020	Rab7, putative. (200 aa)
	ACA1_360180	Ras subfamily protein. (206 aa)
	ACA1_070500	Ras subfamily protein. (211 aa)
	ACA1_071100	Small rabrelated GTPase. (203 aa)
	ACA1_139260	GTPbinding protein. (195 aa)
	ACA1_192350	Methyltransferase domain containing protein. (280 aa)
	ACA1_163360	Ras subfamily protein. (587 aa)
	ACA1_191700	Ras subfamily protein. (478 aa)
	ACA1_076440	Ras subfamily protein. (233 aa)
	ACA1_077100	Rab1/RabDfamily small GTPase. (184 aa)
	ACA1_164860	Ras subfamily protein. (181 aa)
	ACA1_216300	Ras family protein. (803 aa)
	ACA1_218470	Rasrelated protein Rab-21, putative. (123 aa)
	ACA1_378750	Uncharacterized protein. (840 aa)
	ACA1_325160	Rab7/RabGfamily small GTPase. (186 aa)
	ACA1_211500	RAB5B protein, putative. (558 aa)
	ACA1_164790	Ras-related protein Rab-2A, putative. (200 aa)
	ACA1_216930	Rab11/RabAfamily small GTPase. (186 aa)
	ACA1_070630	Rasrelated protein ORAB-1, putative. (210 aa)
	ACA1_360170	Ras subfamily protein. (194 aa)
	ACA1_036030	RAB4, putative. (204 aa)
	ACA1_365410	Ras subfamily protein. (578 aa)
	ACA1_364700	Ras family protein. (217 aa)
	ACA1_359270	RAB family member (Rab7), putative. (206 aa)
	ACA1_246860	Likely rab family GTPbinding protein. (221 aa)
	ACA1_091860	Rasrelated protein Rab5, putative. (218 aa)
	ACA1_246780	Ras subfamily protein. (191 aa)
	ACA1_243420	Ras subfamily protein. (264 aa)
	ACA1_097370	Ras subfamily protein. (174 aa)
	ACA1_091830	Ras subfamily Rab protein. (256 aa)
	ACA1_151930	Ras subfamily protein. (298 aa)
	ACA1_399850	Ras family protein. (228 aa)
	ACA1_256400	Ras subfamily protein. (237 aa)
	ACA1_151500	Ras subfamily protein. (244 aa)
	ACA1_152200	Ras subfamily protein. (320 aa)
	ACA1_295840	Ras subfamily protein. (202 aa)
	ACA1_040890	Rabtype small GTP-binding protein. (192 aa)
	ACA1_036890	Ras subfamily protein. (207 aa)
	ACA1_167050	Ras subfamily protein. (434 aa)
	ACA1_138370	Ras subfamily protein. (514 aa)
	ACA1_369270	Rasrelated protein Rab-18-like, putative. (209 aa)
	ACA1_367900	Raslike GTP-binding protein YPT1, putative. (212 aa)
	ACA1_010610	Fbox domain and Ankyrin repeat containing protein. (519 aa)
	ACA1_090170	Ras subfamily protein. (514 aa)
	ACA1_087420	Ras family protein. (401 aa)
	ACA1_379220	FYVE zinc finger domain containing protein. (333 aa)
	ACA1_382920	Ras subfamily protein. (550 aa)
	ACA1_279530	Rab4, putative. (213 aa)
	ACA1_286140	Ras subfamily protein. (357 aa)
	ACA1_285220	Protein prenyltransferase alpha subunit repeat-containing protein. (381 aa)
	ACA1_227760	Ras subfamily protein. (126 aa)
	ACA1_384590	RAB1B, member RAS oncogene family. (198 aa)
	ACA1_054110	Ras subfamily protein. (266 aa)
	ACA1_175240	Rab32 protein, putative. (216 aa)
	ACA1_229200	Ras-related protein Rab-1A, putative. (172 aa)
	ACA1_052540	Ankyrin domain containing ras subfamily protein. (331 aa)
	ACA1_181840	Ras subfamily protein. (275 aa)
	ACA1_054760	Ras family protein. (219 aa)
	ACA1_054710	Ras family protein. (128 aa)
	ACA1_206060	Ras subfamily protein. (259 aa)
	ACA1_054700	Ras subfamily protein. (94 aa)
	ACA1_201200	Ras subfamily protein. (526 aa)
	ACA1_301250	RAB36 member RAS oncogene family protein. (273 aa)
	ACA1_269260	Ras family protein. (211 aa)
	ACA1_201470	Rasrelated protein Rab-2B, putative. (216 aa)
	ACA1_325150	Rab7/RabGfamily small GTPase. (205 aa)
	ACA1_252170	Ras subfamily protein. (343 aa)
	ACA1_050860	RAS and EFhand domain containing, putative. (98 aa)
	ACA1_051680	Ras subfamily protein. (398 aa)
	ACA1_211270	Rasrelated protein Rab-39B, putative. (244 aa)
	ACA1_296250	Rasrelated protein Rab-32, putative. (238 aa)
	ACA1_264460	GTPbinding protein. (184 aa)
	ACA1_289900	RAB11B protein, putative. (213 aa)
	ACA1_110390	Ras-related protein Rab-2-B. (220 aa)
	ACA1_384340	Ras subfamily protein. (207 aa)
	ACA1_328080	Rab GTPase, putative. (228 aa)
	ACA1_126680	Ras family protein. (220 aa)
	ACA1_253150	RAB8D, putative. (223 aa)

Your Current Organism:

Acanthamoeba castellanii

NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACA1_010610	ACA1_036030	L8GTH9	L8HCK2	Fbox domain and Ankyrin repeat containing protein.	RAB4, putative.	0.440
ACA1_010610	ACA1_064400	L8GTH9	L8GWR5	Fbox domain and Ankyrin repeat containing protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.442
ACA1_010610	ACA1_279530	L8GTH9	L8H946	Fbox domain and Ankyrin repeat containing protein.	Rab4, putative.	0.411
ACA1_036030	ACA1_010610	L8HCK2	L8GTH9	RAB4, putative.	Fbox domain and Ankyrin repeat containing protein.	0.440
ACA1_036030	ACA1_040890	L8HCK2	L8H1Y4	RAB4, putative.	Rabtype small GTP-binding protein.	0.464
ACA1_036030	ACA1_050860	L8HCK2	L8GPI5	RAB4, putative.	RAS and EFhand domain containing, putative.	0.449
ACA1_036030	ACA1_051680	L8HCK2	L8GPK3	RAB4, putative.	Ras subfamily protein.	0.406
ACA1_036030	ACA1_054110	L8HCK2	L8H889	RAB4, putative.	Ras subfamily protein.	0.453
ACA1_036030	ACA1_054710	L8HCK2	L8H6F4	RAB4, putative.	Ras family protein.	0.413
ACA1_036030	ACA1_064400	L8HCK2	L8GWR5	RAB4, putative.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.764
ACA1_036030	ACA1_071100	L8HCK2	L8HD72	RAB4, putative.	Small rabrelated GTPase.	0.426
ACA1_036030	ACA1_076440	L8HCK2	L8GNH9	RAB4, putative.	Ras subfamily protein.	0.446
ACA1_036030	ACA1_087350	L8HCK2	L8GVD3	RAB4, putative.	Protein prenyltransferase, putative.	0.618
ACA1_036030	ACA1_087380	L8HCK2	L8GWU2	RAB4, putative.	Ras subfamily protein.	0.438
ACA1_036030	ACA1_087400	L8HCK2	L8GVE2	RAB4, putative.	Ras subfamily protein.	0.460
ACA1_036030	ACA1_087450	L8HCK2	L8GVE7	RAB4, putative.	Ras subfamily protein.	0.447
ACA1_036030	ACA1_090170	L8HCK2	L8GU59	RAB4, putative.	Ras subfamily protein.	0.435
ACA1_036030	ACA1_091830	L8HCK2	L8GIV3	RAB4, putative.	Ras subfamily Rab protein.	0.424
ACA1_036030	ACA1_091860	L8HCK2	L8GKG8	RAB4, putative.	Rasrelated protein Rab5, putative.	0.418
ACA1_036030	ACA1_138370	L8HCK2	L8GZI5	RAB4, putative.	Ras subfamily protein.	0.406

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