STRINGSTRING
ACA1_180170 ACA1_180170 ACA1_189590 ACA1_189590 ACA1_258700 ACA1_258700 ACA1_098220 ACA1_098220 LSM4 LSM4 ACA1_096220 ACA1_096220 ACA1_364250 ACA1_364250 ACA1_366660 ACA1_366660 ACA1_017740 ACA1_017740 ACA1_271270 ACA1_271270 ACA1_378890 ACA1_378890 ACA1_188720 ACA1_188720 ACA1_275720 ACA1_275720 ACA1_178460 ACA1_178460 ACA1_204440 ACA1_204440 ACA1_088590 ACA1_088590 ACA1_128510 ACA1_128510 ACA1_058850 ACA1_058850 ACA1_061690 ACA1_061690 ACA1_042000 ACA1_042000 ACA1_063780 ACA1_063780 ACA1_155420 ACA1_155420 ACA1_234620 ACA1_234620 ACA1_233080 ACA1_233080 ACA1_298790 ACA1_298790 ACA1_113910 ACA1_113910 ACA1_115860 ACA1_115860 ACA1_182290 ACA1_182290 ACA1_230190 ACA1_230190 ACA1_055970 ACA1_055970 ACA1_283280 ACA1_283280 ACA1_158500 ACA1_158500 LSM3 LSM3 ACA1_254420 ACA1_254420 ACA1_012330 ACA1_012330 ACA1_160040 ACA1_160040 ACA1_360300 ACA1_360300 LSM1 LSM1 ACA1_070160 ACA1_070160 ACA1_148530 ACA1_148530 ACA1_072540 ACA1_072540 ACA1_072170 ACA1_072170 ACA1_073070 ACA1_073070 ACA1_287750 ACA1_287750 ACA1_175190 ACA1_175190 ACA1_165840 ACA1_165840 ACA1_291020 ACA1_291020 ACA1_291120 ACA1_291120 ACA1_171650 ACA1_171650 ACA1_295350 ACA1_295350 LSM8 LSM8 ACA1_290670 ACA1_290670
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACA1_180170RNA-binding domain-containing protein. (240 aa)
ACA1_189590Transcriptional regulatorrelated, putative. (2391 aa)
ACA1_258700Exosc8 protein. (278 aa)
ACA1_098220Endo/exonuclease/phosphatase domain-containing protein. (477 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (131 aa)
ACA1_096220Polynucleotide adenylyltransferase. (777 aa)
ACA1_3642503' exoribonuclease family, domain 1 domain containing protein. (524 aa)
ACA1_366660Nocturnin, putative. (433 aa)
ACA1_0177405'-3' exoribonuclease 1. (1421 aa)
ACA1_271270Atpdependent rna helicase ddx6, putative; Belongs to the DEAD box helicase family. (407 aa)
ACA1_378890Ccr4associated factor, putative. (275 aa)
ACA1_188720Mphase phosphoprotein 6, putative. (170 aa)
ACA1_275720Enolase, Cterminal TIM barrel domain containing protein. (435 aa)
ACA1_178460PAP/25A associated domain containing protein. (471 aa)
ACA1_204440Uncharacterized protein. (986 aa)
ACA1_088590Scavenger mrna decapping enzyme (Dcps) protein. (540 aa)
ACA1_128510Chaperonin GroL, putative; Belongs to the chaperonin (HSP60) family. (575 aa)
ACA1_058850Chaperone protein DnaK, putative; Belongs to the heat shock protein 70 family. (669 aa)
ACA1_0616903' exoribonuclease family, domain 1 domain containing protein. (236 aa)
ACA1_042000SnRNP core protein SMX5d, putative. (113 aa)
ACA1_063780Nucleotidyltransferase domain containing protein. (911 aa)
ACA1_155420WD domain, Gbeta repeat-containing protein. (304 aa)
ACA1_234620Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (462 aa)
ACA1_233080NOT2 / NOT3 / NOT5 family protein. (763 aa)
ACA1_2987903'5' exonuclease domain containing protein. (929 aa)
ACA1_113910Uncharacterized protein. (1345 aa)
ACA1_115860NOT2 / NOT3 / NOT5 family protein. (701 aa)
ACA1_182290RRM domain-containing protein. (172 aa)
ACA1_230190RNA recognition motif domain containing protein. (417 aa)
ACA1_055970Chaperone protein dnak, putative. (381 aa)
ACA1_283280Hydrolase, NUDIX domain containing protein. (153 aa)
ACA1_158500Hydrolase nudix family protein. (388 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
ACA1_254420Dcp1 family decapping family protein. (510 aa)
ACA1_012330WD domain, G-beta repeat-containing protein. (1186 aa)
ACA1_160040Ribonuclease, putative. (546 aa)
ACA1_3603003' exoribonuclease family, domain 1 domain containing protein. (274 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (135 aa)
ACA1_070160Tetratricopeptide repeat-containing protein. (796 aa)
ACA1_148530Zinc knuckle domain containing protein. (557 aa)
ACA1_072540Smlike protein LSm6, putative. (84 aa)
ACA1_072170Poly(A)specific ribonuclease subunit protein, putative. (1048 aa)
ACA1_073070Exosome component 3, putative. (233 aa)
ACA1_287750Sas10/Utp3/C1D family protein. (172 aa)
ACA1_1751906phosphofructokinase. (888 aa)
ACA1_165840BTG family protein. (243 aa)
ACA1_291020Exosome complex exonuclease rrp41, putative. (205 aa)
ACA1_291120PUA domain containing protein. (920 aa)
ACA1_171650Exosome component 7, putative. (263 aa)
ACA1_295350RNA binding domain containing protein. (631 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (94 aa)
ACA1_290670Sm domain-containing protein. (96 aa)
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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