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| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (209 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (149 aa) |
| | KXI14824.1 | ABC1 family protein; KEGG: hor:Hore_12230 1.9e-77 2-octaprenylphenol hydroxylase K03688; Psort location: CytoplasmicMembrane, score: 8.78. (555 aa) |
| | KXI14850.1 | Hypothetical protein; KEGG: mas:Mahau_2889 1.5e-19 heparan-alpha-glucosaminide N-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (463 aa) |
| | KXI14858.1 | S1 RNA binding domain protein; KEGG: fma:FMG_0826 1.2e-54 fused penicillin tolerance LytB domain-containing protein/30S ribosomal protein S1; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Psort location: Cytoplasmic, score: 9.97. (432 aa) |
| | KXI14705.1 | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (415 aa) |
| | rpmE | Ribosomal protein L31; Binds the 23S rRNA. (66 aa) |
| | KXI14684.1 | Hypothetical protein; KEGG: efc:EFAU004_02384 4.1e-13 HNH endonuclease; Psort location: Cytoplasmic, score: 7.50. (110 aa) |
| | KXI14639.1 | Hypothetical protein. (202 aa) |
| | KXI14547.1 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (499 aa) |
| | KXI14467.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: slg:SLGD_00342 1.3e-57 two-component sensor histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 9.99. (286 aa) |
| | rplS | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (124 aa) |
| | KXI14398.1 | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (295 aa) |
| | KXI14401.1 | Dehydrogenase, FMN-dependent; KEGG: dca:Desca_1949 1.3e-96 (S)-2-hydroxy-acid oxidase; Psort location: Cytoplasmic, score: 7.50. (339 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (689 aa) |
| | rarA | ATPase, AAA family; Psort location: Cytoplasmic, score: 7.50. (423 aa) |
| | yrrK | RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (140 aa) |
| | cobB | Putative NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. (254 aa) |
| | KXI14428.1 | Cyclic nucleotide-binding domain protein; Psort location: Cytoplasmic, score: 7.50. (224 aa) |
| | KXI14432.1 | KEGG: cdg:CDBI1_11280 5.4e-233 inosine 5-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50. (499 aa) |
| | KXI14348.1 | CBS domain protein; KEGG: cbj:H04402_01195 8.5e-29 inosine-5'-monophosphate dehydrogenase. (146 aa) |
| | purF | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (479 aa) |
| | KXI14360.1 | DNA topoisomerase; KEGG: cdl:CDR20291_2294 1.6e-270 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.67. (733 aa) |
| | rpsB | Ribosomal protein S2; KEGG: apb:SAR116_0519 1.1e-60 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family. (259 aa) |
| | KXI14320.1 | Hypothetical protein. (380 aa) |
| | KXI14238.1 | DNA-binding helix-turn-helix protein; KEGG: apb:SAR116_1185 2.0e-06 transcriptional regulator. (194 aa) |
| | rplT | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa) |
| | rpmI | Ribosomal protein L35; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL35 family. (65 aa) |
| | KXI14260.1 | Homocitrate synthase; KEGG: cbk:CLL_A0128 4.7e-154 aksA; trans-homoaconitate synthase K02594; Psort location: Cytoplasmic, score: 7.50; Belongs to the alpha-IPM synthase/homocitrate synthase family. (396 aa) |
| | KXI14261.1 | DEAD-box ATP-dependent RNA helicase CshA family protein; KEGG: cbk:CLL_A1477 1.4e-97 cold-shock deAd box protein a; Psort location: Cytoplasmic, score: 9.97. (366 aa) |
| | KXI14040.1 | KEGG: cdg:CDBI1_02485 2.1e-96 ornithine cyclodeaminase K01750; Psort location: Cytoplasmic, score: 7.50. (327 aa) |
| | KXI14045.1 | Putative calcium-translocating P-type ATPase, PMCA-type; KEGG: cdc:CD196_2348 3.2e-274 cation-transporting ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00. (903 aa) |
| | nadD | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (229 aa) |
| | rnz | Putative ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (300 aa) |
| | KXI14067.1 | KEGG: apb:SAR116_0666 7.8e-19 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0758 family. (219 aa) |
| | KXI13886.1 | SufB/sufD domain protein; KEGG: apb:SAR116_0016 2.2e-11 Fe-S center production/stability protein SufD K09015. (276 aa) |
| | KXI13887.1 | KEGG: suc:ECTR2_773 1.0e-133 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50. (470 aa) |
| | yurY | FeS assembly ATPase SufC; KEGG: ppo:PPM_1514 3.3e-66 yurY; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K09013; Psort location: Cytoplasmic, score: 9.97. (263 aa) |
| | KXI13722.1 | ThiF family protein; KEGG: bpb:bpr_I2644 1.1e-49 thiF; thiamine biosynthesis protein ThiF; Psort location: Cytoplasmic, score: 9.97. (237 aa) |
| | KXI13734.1 | Acetyltransferase, GNAT family; KEGG: lcb:LCABL_25110 1.1e-10 wecD; acetyltransferase K06975; Psort location: Cytoplasmic, score: 7.50. (83 aa) |
| | rpmF | Ribosomal protein L32; KEGG: apb:SAR116_0011 5.9e-05 50S ribosomal protein L32 K02911; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL32 family. (59 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa) |
| | rpmB | Ribosomal protein L28; KEGG: apb:SAR116_1905 0.0023 50S ribosomal protein L28 K02902; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL28 family. (62 aa) |
| | priA | Primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (869 aa) |
| | KXI13760.1 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (401 aa) |
| | yabJ | Putative endoribonuclease L-PSP; KEGG: zga:zobellia_3738 2.2e-30 endoribonuclease K07567; Psort location: Cytoplasmic, score: 9.97. (124 aa) |
| | rpmA | Ribosomal protein L27; KEGG: apb:SAR116_1855 5.3e-20 50S ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL27 family. (96 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (102 aa) |
| | KXI13800.1 | ATPase family protein; KEGG: bcz:BCZK0535 2.6e-34 norQ; nitric-oxide reductase K04748; Psort location: Cytoplasmic, score: 7.50. (310 aa) |
| | sbcD | Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (406 aa) |
| | KXI13808.1 | Cation diffusion facilitator family transporter; KEGG: mja:MJ_0449 1.6e-27 hypothetical protein; K01529; Psort location: CytoplasmicMembrane, score: 9.99. (371 aa) |
| | pdxS | Pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (287 aa) |
| | KXI13559.1 | Putative PTS system glucose-specific EIICBA component; KEGG: cbe:Cbei_0751 5.1e-228 PTS system glucose subfamily transporter subunit IIA; K02763 PTS system, D-glucosamine-specific IIA component; K02764 PTS system, D-glucosamine-specific IIB component K02765; Psort location: CytoplasmicMembrane, score: 10.00. (710 aa) |
| | engD | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (365 aa) |
| | KXI13510.1 | S4 domain protein; Psort location: Cytoplasmic, score: 7.50. (260 aa) |
| | KXI13517.1 | KEGG: cdc:CD196_1065 2.8e-101 ispA; geranyltranstransferase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family. (295 aa) |
| | KXI13521.1 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (574 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (226 aa) |
| | KXI13462.1 | KEGG: cdc:CD196_0498 7.8e-161 phosphoribulokinase/uridine kinase; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97. (550 aa) |
| | selO | Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (524 aa) |
| | purD | KEGG: cdf:CD0224 1.1e-163 purD; phosphoribosylamine--glycine ligase K01945; Psort location: Cytoplasmic, score: 7.50; Belongs to the GARS family. (422 aa) |
| | dhaD | KEGG: faa:HMPREF0389_00676 1.5e-143 glycerol dehydrogenase; K00005 glycerol dehydrogenase; Psort location: Cytoplasmic, score: 7.50. (366 aa) |
| | KXI13387.1 | Rubrerythrin; KEGG: cbl:CLK_2114 0.0059 glycosyl transferase family protein; Psort location: Cytoplasmic, score: 7.50. (168 aa) |
| | KXI13388.1 | FMN-binding domain protein; KEGG: dsy:DSY3139 1.7e-07 fumarate reductase flavoprotein subunit; K00244 fumarate reductase flavoprotein subunit. (292 aa) |
| | KXI13306.1 | FMN-binding domain protein; KEGG: dsy:DSY3139 3.5e-13 fumarate reductase flavoprotein subunit; K00244 fumarate reductase flavoprotein subunit; Psort location: Cellwall, score: 9.21. (428 aa) |
| | KXI13307.1 | FMN-binding domain protein; KEGG: scc:Spico_0350 1.9e-11 flavocytochrome c; K00244 fumarate reductase flavoprotein subunit. (174 aa) |
| | KXI13309.1 | Putative cell wall binding repeat 2; KEGG: ctc:CTC00504 1.5e-42 cwp66 homolog/N-acetylmuramoyl-L-alanine amidase K01446; Psort location: Cellwall, score: 9.94. (1367 aa) |
| | KXI13310.1 | Hypothetical protein. (70 aa) |
| | KXI13282.1 | Hypothetical protein; KEGG: hpl:HPB8_872 5.7e-07 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 7.50. (442 aa) |
| | KXI13284.1 | Hypothetical protein; KEGG: pmo:Pmob_0426 1.3e-06 RNA-directed DNA polymerase; K00986 RNA-directed DNA polymerase; Psort location: Cytoplasmic, score: 7.50. (536 aa) |
| | KXI13290.1 | Virulence-associated protein E; Psort location: Cytoplasmic, score: 7.50. (487 aa) |
| | KXI13239.1 | Stage II sporulation protein E; KEGG: lbi:LEPBI_I1575 6.2e-23 putative phosphodiesterase or phosphatase K07315. (588 aa) |
| | KXI13221.1 | D-proline reductase, PrdA proprotein; KEGG: cdc:CD196_3054 3.1e-95 hypothetical protein; K10795 D-proline reductase (dithiol) PrdD; Psort location: Cytoplasmic, score: 9.97. (254 aa) |
| | KXI13095.1 | Amidohydrolase; KEGG: ccb:Clocel_0857 1.1e-140 amidohydrolase; Psort location: Cytoplasmic, score: 7.50. (387 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (207 aa) |
| | rplW | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (96 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (276 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa) |
| | rplV | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (118 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (265 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (140 aa) |
| | rpmC | Ribosomal protein L29; KEGG: apb:SAR116_2399 3.0e-10 50S ribosomal protein L29 K02904; Psort location: Cytoplasmic, score: 7.50; Belongs to the universal ribosomal protein uL29 family. (67 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (93 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (101 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (180 aa) |
| | rpsN1 | Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (180 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (125 aa) |
| | rpsE | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (169 aa) |
| | rpmD | Ribosomal protein L30; KEGG: apb:SAR116_2409 4.6e-05 50S ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.67. (61 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (147 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (216 aa) |
| | KXI13120.1 | KEGG: cbt:CLH_0474 0.0072 hemK; protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase; Psort location: Cytoplasmic, score: 7.50. (89 aa) |
| | rpmJ | Ribosomal protein L36; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (123 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (133 aa) |
| | rplQ | Ribosomal protein L17; KEGG: apb:SAR116_2416 1.9e-22 50S ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.97. (113 aa) |
| | KXI13004.1 | Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: hpk:Hprae_2023 1.0e-30 tRNA-adenosine deaminase; Psort location: Cytoplasmic, score: 9.97. (154 aa) |
| | gyrB | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (635 aa) |
| | recF | Putative DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (371 aa) |
| | rpmH | Ribosomal protein L34; KEGG: rri:A1G_05155 1.0e-09 rpmH; 50S ribosomal protein L34 K02914; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (96 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (82 aa) |
| | KXI13048.1 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (448 aa) |
| | KXI13049.1 | Putative DNA replication protein DnaC; Psort location: Cytoplasmic, score: 7.50. (328 aa) |
| | KXI13050.1 | DnaD domain protein; Psort location: Cytoplasmic, score: 7.50. (350 aa) |
| | KXI13052.1 | Metallo-beta-lactamase domain protein; KEGG: bya:BANAU_3915 2.0e-52 yycJ; ribonuclease J2. (266 aa) |
| | mrnC | RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (135 aa) |
| | KXI12884.1 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (263 aa) |
| | rpsI | Ribosomal protein S9; KEGG: apb:SAR116_0492 1.6e-27 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.67; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (164 aa) |
| | udk | Uridine kinase; KEGG: rho:RHOM_08625 2.1e-71 uridine/cytidine kinase K00876; Psort location: Cytoplasmic, score: 9.97. (212 aa) |
| | KXI12870.1 | DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (114 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa) |
| | KXI12742.1 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (174 aa) |
| | KXI12491.1 | Hypothetical protein; KEGG: rho:RHOM_02055 1.2e-07 phage DNA methylase; K13581 modification methylase; Psort location: Extracellular, score: 8.91. (47 aa) |
| | KXI12448.1 | KEGG: llt:CVCAS_0990 5.1e-38 pp130; phage DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. (196 aa) |
| | KXI12421.1 | Phage replisome organizer protein. (91 aa) |
| | rnmV | Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. (176 aa) |
| | KXI12130.1 | KEGG: llt:CVCAS_0990 8.3e-54 pp130; phage DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. (249 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (431 aa) |
| | KXI12058.1 | Amidohydrolase; KEGG: sab:SAB1253 5.2e-77 peptidase; Psort location: Cytoplasmic, score: 7.50. (385 aa) |
| | KXI12063.1 | Amidohydrolase; KEGG: crn:CAR_c02690 2.0e-98 yhaA1; putative amidohydrolase YhaA; Psort location: Cytoplasmic, score: 7.50. (421 aa) |
| | KXI12068.1 | ATP synthase, subunit C; KEGG: lba:Lebu_0756 2.3e-65 H(+)-transporting two-sector ATPase; K02119 V-type H+-transporting ATPase subunit C; Psort location: Cytoplasmic, score: 7.50. (333 aa) |
| | ntpG | ATP synthase, subunit F; KEGG: ctc:CTC00998 3.3e-34 V-type ATP synthase subunit F K02122. (107 aa) |
| | atpB | ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (461 aa) |
| | KXI11904.1 | KEGG: elm:ELI_3093 1.6e-73 nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating); Psort location: Cytoplasmic, score: 7.50; Belongs to the NadC/ModD family. (282 aa) |
| | rpmG2 | Ribosomal protein L33; KEGG: mmo:MMOB5490 5.0e-08 rpmG; 50S ribosomal protein L33 K02913; Belongs to the bacterial ribosomal protein bL33 family. (49 aa) |
| | rplK | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (232 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (172 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (121 aa) |
| | KXI11837.1 | NAD dependent epimerase/dehydratase family protein; KEGG: efu:HMPREF0351_11331 4.2e-107 galE2; UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 7.50. (313 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (243 aa) |
| | ispE | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (298 aa) |
| | KXI11892.1 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (319 aa) |
| | KXI11760.1 | 8-oxoguanine DNA-glycosylase; KEGG: cdl:CDR20291_0192 7.7e-99 DNA glycosylase; K03660 N-glycosylase/DNA lyase; Psort location: Cytoplasmic, score: 7.50. (296 aa) |
| | hup | DNA-binding protein HU; KEGG: apb:SAR116_0125 6.3e-17 histone family protein DNA-binding protein K03530; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial histone-like protein family. (92 aa) |
| | bioB | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (331 aa) |
| | rpsT | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa) |
| | KXI11599.1 | Thioredoxin; KEGG: cdb:CDBH8_2368 1.3e-14 trxC; thioredoxin K03671; Psort location: Cytoplasmic, score: 7.50; Belongs to the thioredoxin family. (137 aa) |
| | smc | Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1187 aa) |
| | rpsP | Ribosomal protein S16; KEGG: apb:SAR116_1817 3.8e-17 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.95; Belongs to the bacterial ribosomal protein bS16 family. (83 aa) |
| | KXI11638.1 | Hypothetical protein. (1636 aa) |
| | KXI11524.1 | Hypothetical protein; KEGG: mig:Metig_0746 0.0060 adenine-specific DNA methyltransferase; K03427 type I restriction enzyme M protein. (205 aa) |
| | KXI11503.1 | Hypothetical protein; KEGG: efc:EFAU004_02384 3.2e-06 HNH endonuclease; Psort location: Cytoplasmic, score: 7.50. (146 aa) |
| | KXI11432.1 | KEGG: apb:SAR116_1869 2.5e-38 electron transfer flavoprotein subunit alpha K03522; Psort location: Cytoplasmic, score: 7.50. (335 aa) |
| | KXI11434.1 | KEGG: csh:Closa_3005 5.1e-118 butyryl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97. (377 aa) |
| | frc_2 | KEGG: clo:HMPREF0868_0592 4.8e-161 fldA; cinnamoyl-CoA:phenyllactate CoA-transferase K13607; Psort location: Cytoplasmic, score: 9.97; Belongs to the CoA-transferase III family. (412 aa) |
| | KXI11255.1 | Iron-only hydrogenase maturation rSAM protein HydE; KEGG: cbl:CLK_3055 8.6e-107 biotin synthase; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 7.50. (350 aa) |
| | KXI11265.1 | Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: bmd:BMD_2094 1.7e-39 short-chain dehydrogenase K07124; Psort location: Cytoplasmic, score: 9.67; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (266 aa) |
| | KXI11275.1 | Transposase, IS605 OrfB family; KEGG: hpa:HPAG1_0201 4.3e-50 putative transposase OrfB K07496. (416 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (140 aa) |
| | KXI10814.1 | DNA-binding helix-turn-helix protein; KEGG: gya:GYMC52_2962 2.9e-28 XRE family transcriptional regulator; K01356 repressor LexA. (226 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (612 aa) |
| | KXI10874.1 | Adenosine deaminase; KEGG: cdf:CD1747 2.8e-85 add; adenosine deaminase K01488; Psort location: Cytoplasmic, score: 7.50. (338 aa) |
| | KXI10899.1 | KEGG: fma:FMG_0302 2.2e-53 hypothetical protein; K14941 2-phospho-L-lactate guanylyltransferase; Psort location: Cytoplasmic, score: 7.50. (386 aa) |
| | trxA_1 | Thioredoxin; KEGG: nwi:Nwi_0051 7.0e-18 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.67; Belongs to the thioredoxin family. (105 aa) |
| | rpsO | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (85 aa) |
| | KXI10925.1 | KEGG: cdl:CDR20291_1155 1.7e-78 ribC; riboflavin biosynthesis protein; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the ribF family. (308 aa) |
| | KXI10927.1 | DHHA1 domain protein; KEGG: ppo:PPM_1934 1.1e-42 mipP; putative manganese-dependent inorganic pyrophosphatase K06881; Psort location: Cytoplasmic, score: 7.50. (343 aa) |
| | KXI10930.1 | Ribosomal protein L7Ae. (105 aa) |
| | KXI10939.1 | Acetyltransferase, GNAT family; KEGG: sds:SDEG_0903 6.7e-36 histone acetyltransferase HPA2-like protein K00680; Psort location: Cytoplasmic, score: 7.50. (145 aa) |
| | KXI10943.1 | Phage replisome organizer protein; KEGG: saf:SULAZ_0834 0.0018 atpC; ATP synthase F1 subunit epsilon K02114. (142 aa) |
| | KXI10673.1 | Hypothetical protein; KEGG: edi:EDI_282700 0.00026 structural maintenance of chromosomes protein K06669. (117 aa) |
| | KXI10674.1 | Hypothetical protein. (172 aa) |
| | KXI10592.1 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (375 aa) |
| | KXI10593.1 | Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 5.7e-06 DNA polymerase family B containing protein K02350; Psort location: Cytoplasmic, score: 7.50. (388 aa) |
| | fhs | KEGG: cdg:CDBI1_03430 3.4e-247 formate--tetrahydrofolate ligase K01938; Psort location: Cytoplasmic, score: 7.50. (597 aa) |
| | fchA | Formiminotransferase-cyclodeaminase; KEGG: ddh:Desde_3684 5.1e-38 methenyl tetrahydrofolate cyclohydrolase; Psort location: Cytoplasmic, score: 9.67. (207 aa) |
| | KXI10612.1 | KEGG: cdf:CD0753 1.0e-119 iscS1; cysteine desulfurase K04487; Psort location: Cytoplasmic, score: 9.97. (387 aa) |
| | frc_3 | III protein, CoA-transferase family; KEGG: cby:CLM_2400 2.1e-128 hadA; 3-methyl-2-oxobutanoate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the CoA-transferase III family. (403 aa) |
| | KXI10621.1 | butyryl-CoA dehydrogenase; KEGG: cbo:CBO2196 9.8e-154 acdB; acyl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97. (380 aa) |
| | etfA_3 | KEGG: apb:SAR116_1869 1.8e-42 electron transfer flavoprotein subunit alpha K03522; Psort location: Cytoplasmic, score: 7.50. (337 aa) |
| | KXI10625.1 | KEGG: cdg:CDBI1_03645 5.0e-214 putative ATP-dependent RNA helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family. (547 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (201 aa) |
| | bcp | Putative peroxiredoxin bcp; KEGG: elm:ELI_3020 1.4e-44 hypothetical protein; K03564 peroxiredoxin Q/BCP; Psort location: Cellwall, score: 8.19. (161 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (248 aa) |
| | KXI10501.1 | Magnesium transporter; Acts as a magnesium transporter. (459 aa) |
| | KXI10503.1 | PAP2 family protein; KEGG: cdg:CDBI1_11850 2.2e-85 membrane-associated kinase and phosphatase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00. (252 aa) |
| | ybeY | Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (158 aa) |
| | hpf | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (183 aa) |
| | rpsU | Ribosomal protein S21; KEGG: sew:SeSA_A3399 1.6e-11 rpsU; 30S ribosomal protein S21 K02970; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial ribosomal protein bS21 family. (77 aa) |
| | KXI10523.1 | KEGG: pmo:Pmob_0121 5.4e-66 IS605 family transposase OrfB; Psort location: Cytoplasmic, score: 7.50. (392 aa) |
| | KXI10413.1 | Hypothetical protein; KEGG: fno:Fnod_0508 0.0015 type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 7.50. (109 aa) |
| | KXI10415.1 | Phage replisome organizer protein. (168 aa) |
| | tktA | KEGG: cdg:CDBI1_16920 1.5e-84 transketolase, thiamine disphosphate-binding subunit; K00615 transketolase; Psort location: Cytoplasmic, score: 7.50. (270 aa) |
| | KXI10346.1 | Hypothetical protein; KEGG: cpr:CPR_2286 8.2e-07 bcd; butyryl-CoA dehydrogenase K00248. (50 aa) |
| | KXI10101.1 | Hypothetical protein; KEGG: sgg:SGGBAA2069_c13480 2.2e-60 GBSi1; GBSi1, group II intron, maturase; Psort location: Cytoplasmic, score: 7.50. (174 aa) |
